PRIME: a graphical interface for integrating genomic/proteomic databases.
Data mining, finding and integration of information about proteins of interest, is an essential component in modern biological and biomedical research. Even when focusing on a single organism and only on a small number of proteins, there are often dozens fo data sources containing relevant information. We are developing PRIME, a protein information environment, to serve as a virtual central database which integrates distributed heterogeneous information about proteins (linked by common identifier). PRIME has powerful capabilities to visualize all kinds of protein annotation in specialized views. These views can be displayed side by side at the same time and can be synchronized in order to show simultaneously different aspects of identical proteins. These features allow a quick and comprehensive overview of properties of single proteins or protein sets.
Facius
Axel
A
Institute for Bioinformatics, GSF Research Center, D-85764 Neuherberg, Germany. a.facius@gsf.de
Englbrecht
Claudia
C
Birzele
Fabian
F
Groscurth
Andreas
A
Benjamin
Schmidt
S
Wanka
Steffi
S
Mewes
Werner
W
D019295:Computational Biology; D030561:Databases, Nucleic Acid; D030562:Databases, Protein; D023281:Genomics; D033181:Information Dissemination; D020407:Internet; D040901:Proteomics; D012984:Software