title: Escherichia coli ORF ybhE is pgl gene encoding 6-phosphogluconolactonase (EC 3.1.1.31) that has no homology with known 6PGLs from other organisms.
abstract: The pentose-phosphate pathway (PPP) is an important part of central metabolism in many organisms. A pgl(-) mutation that decreases the efficiency of the second stage of PPP has been described and mapped at approx. 17.2 min of the Escherichia coli chromosome more than 30 years ago. Although it has recently been shown that deletion of ORF ybhE leads to earlier detected Pgl(-) phenotype for E. coli mutant strain, 6-phosphogluconolactonase from this organism has not been characterized. In the present, independent investigation we show that the Pgl(-) phenotype of DeltaybhE MG1655 could be complemented by insertion of the well-characterized pgl gene from Pseudomonas putida whose protein product has no visible homology with E. coli YbhE. Moreover, a final confirmation that ybhE actually encodes 6PGL in E. coli was obtained through overexpression of the cloned gene, purification of the protein product, followed by direct determination of its enzymatic activity in vitro.
authors.affiliation: Ajinomoto-Genetika Research Institute, 1st Dorozhny proezd, Moscow 117545, Russian Federation. danilia_zimenkov@agri.ru
authors.forename: Danila
authors.initials: D
authors.lastname: Zimenkov
authors.forename: Andrey
authors.initials: A
authors.lastname: Gulevich
authors.forename: Aleksandra
authors.initials: A
authors.lastname: Skorokhodova
authors.forename: Irina
authors.initials: I
authors.lastname: Biriukova
authors.forename: Yurii
authors.initials: Y
authors.lastname: Kozlov
authors.forename: Sergey
authors.initials: S
authors.lastname: Mashko
mesh_terms: D002265:Carboxylic Ester Hydrolases / Q000235:genetics* / Q000378:metabolism; D004926:Escherichia coli / Q000201:enzymology / Q000235:genetics* / Q000254:growth & development; D029968:Escherichia coli Proteins / Q000737:chemistry / Q000235:genetics* / Q000378:metabolism; D009154:Mutation; D016366:Open Reading Frames; D010427:Pentose Phosphate Pathway
chemical_list: D029968:Escherichia coli Proteins; D002265:Carboxylic Ester Hydrolases; C022363:6-phosphogluconolactonase