title: Effects on promoter activity of base substitutions in the cis-acting regulatory element of HrpXo regulons in Xanthomonas oryzae pv. oryzae.
abstract: In Xanthomonas oryzae pv. oryzae, the causal agent of bacterial leaf blight of rice, HrpXo is known to be a transcriptional regulator for the hypersensitive response and pathogenicity (hrp) genes. Several HrpXo regulons are preceded by a consensus sequence (TTCGC-N(15)-TTCGC), called the plant-inducible promoter (PIP) box, which is required for expression of the gene that follows. Thus, the PIP box can be an effective marker for screening HrpXo regulons from the genome database. It is not known, however, whether mutations in the PIP box cause a complete loss of promoter activity. In this study, we introduced base substitutions at each of the consensus nucleotides in the PIP box of the hrpC operon in X. oryzae pv. oryzae, and the promoter activity was examined by using a beta-glucuronidase (GUS) reporter gene. Although the GUS activity was generally reduced by base substitutions, several mutated PIP boxes conferred considerable promoter activity. In several cases, even imperfect PIP boxes with two base substitutions retained 20% of the promoter activity found in the nonsubstituted PIP box. We screened HrpXo regulon candidates with an imperfect PIP box obtained from the genome database of X. oryzae pv. oryzae and found that at least two genes preceded by an imperfect PIP box with two base substitutions were actually expressed in an HrpXo-dependent manner. These results indicate that a base substitution in the PIP box is quite permissible for HrpXo-dependent expression and suggest that X. oryzae pv. oryzae may possess more HrpXo regulons than expected.
authors.affiliation: Laboratory of Plant Pathology, Graduate School of Agriculture, Kyoto Prefectural University, Kyoto 606-8522, Japan. s_tsuge@love.kpu.ac.jp
authors.forename: Seiji
authors.initials: S
authors.lastname: Tsuge
authors.forename: Shinsaku
authors.initials: S
authors.lastname: Terashima
authors.forename: Ayako
authors.initials: A
authors.lastname: Furutani
authors.forename: Hirokazu
authors.initials: H
authors.lastname: Ochiai
authors.forename: Takashi
authors.initials: T
authors.lastname: Oku
authors.forename: Kazunori
authors.initials: K
authors.lastname: Tsuno
authors.forename: Hisatoshi
authors.initials: H
authors.lastname: Kaku
authors.forename: Yasuyuki
authors.initials: Y
authors.lastname: Kubo
mesh_terms: D001426:Bacterial Proteins / Q000096:biosynthesis* / Q000235:genetics; D001483:Base Sequence; D015964:Gene Expression Regulation, Bacterial; D005809:Genes, Regulator / Q000235:genetics / Q000502:physiology*; D018551:Solanum lycopersicum / Q000382:microbiology; D008969:Molecular Sequence Data; D016366:Open Reading Frames; D012275:Oryza / Q000382:microbiology; D018515:Plant Leaves / Q000382:microbiology; D011401:Promoter Regions, Genetic / Q000502:physiology*; D018085:Regulon; D014157:Transcription Factors / Q000096:biosynthesis* / Q000235:genetics; D014974:Xanthomonas / Q000235:genetics* / Q000378:metabolism* / Q000472:pathogenicity
chemical_list: D001426:Bacterial Proteins; C080371:HrpX protein, Bacteria; D014157:Transcription Factors