Bioinformatics, genomics and evolution of non-flagellar type-III secretion systems: a Darwinian perspective.
We review the biology of non-flagellar type-III secretion systems from a Darwinian perspective, highlighting the themes of evolution, conservation, variation and decay. The presence of these systems in environmental organisms such as Myxococcus, Desulfovibrio and Verrucomicrobium hints at roles beyond virulence. We review newly discovered sequence homologies (e.g., YopN/TyeA and SepL). We discuss synapomorphies that might be useful in formulating a taxonomy of type-III secretion. The problem of information overload is likely to be ameliorated by launch of a web site devoted to the comparative biology of type-III secretion ().
Pallen
Mark J
MJ
Bacterial Pathogenesis and Genomics Unit, Division of Immunity and Infection, Medical School, University of Birmingham, Birmingham, West Midlands B15 2TT, UK. m.pallen@bham.ac.uk
Beatson
Scott A
SA
Bailey
Christopher M
CM
D000595:Amino Acid Sequence; D001426:Bacterial Proteins / Q000737:chemistry / Q000235:genetics / Q000378:metabolism; D019295:Computational Biology / Q000379:methods*; D019143:Evolution, Molecular; D005407:Flagella / Q000378:metabolism; D015964:Gene Expression Regulation, Bacterial; D023281:Genomics; D006090:Gram-Negative Bacteria / Q000235:genetics / Q000378:metabolism / Q000472:pathogenicity; D008969:Molecular Sequence Data; D014774:Virulence
D001426:Bacterial Proteins