title: Ultrafast excited state dynamics of the protonated Schiff base of all-trans retinal in solvents.
abstract: We present a comparative study of the ultrafast photophysics of all-trans retinal in the protonated Schiff base form in solvents with different polarities and viscosities. Steady-state spectra of retinal in the protonated Schiff base form show large absorption-emission Stokes shifts (6500-8100 cm(-1)) for both polar and nonpolar solvents. Using a broadband fluorescence up-conversion experiment, the relaxation kinetics of fluorescence is investigated with 120 fs time resolution. The time-zero spectra already exhibit a Stokes-shift of approximately 6000 cm(-1), indicating depopulation of the Franck-Condon region in < or =100 fs. We attribute it to relaxation along skeletal stretching. A dramatic spectral narrowing is observed on a 150 fs timescale, which we assign to relaxation from the S(2) to the S(1) state. Along with the direct excitation of S(1), this relaxation populates different quasistationary states in S(1), as suggested from the existence of three distinct fluorescence decay times with different decay associated spectra. A 0.5-0.65 ps decay component is observed, which may reflect the direct repopulation of the ground state, in line with the small isomerization yield in solvents. Two longer decay components are observed and are attributed to torsional motion leading to photo-isomerization. The various decay channels show little or no dependence with respect to the viscosity or dielectric constant of the solvents. This suggests that in the protein, the bond selectivity of isomerization is mainly governed by steric effects.
authors.affiliation: Laboratoire de Spectroscopie Ultrarapide, Ecole Polytechnique Fédérale de Lausanne, Institute of Chemical Sciences and Engineering, FSB-BSP, CH-1015 Lausanne-Dorigny, Switzerland.
authors.forename: Goran
authors.initials: G
authors.lastname: Zgrablić
authors.forename: Kislon
authors.initials: K
authors.lastname: Voïtchovsky
authors.forename: Maik
authors.initials: M
authors.lastname: Kindermann
authors.forename: Stefan
authors.initials: S
authors.lastname: Haacke
authors.forename: Majed
authors.initials: M
authors.lastname: Chergui
mesh_terms: D001436:Bacteriorhodopsins / Q000737:chemistry; D001703:Biophysics / Q000379:methods*; D003510:Cyclohexanes / Q000737:chemistry; D019617:Halobacterium salinarum / Q000378:metabolism; D007700:Kinetics; D000432:Methanol / Q000737:chemistry; D008856:Microscopy, Fluorescence; D015233:Models, Statistical; D000442:Octanols / Q000737:chemistry; D012172:Retinaldehyde / Q000737:chemistry*; D012545:Schiff Bases / Q000737:chemistry*; D012997:Solvents; D013050:Spectrometry, Fluorescence; D013053:Spectrophotometry; D013696:Temperature; D013997:Time Factors; D014466:Ultraviolet Rays; D014801:Vitamin A / Q000737:chemistry*
chemical_list: D003510:Cyclohexanes; D000442:Octanols; D012545:Schiff Bases; D012997:Solvents; D014801:Vitamin A; D001436:Bacteriorhodopsins; D012172:Retinaldehyde; D000432:Methanol