Optimization of the binding properties of a synthetic anion receptor using rational and combinatorial strategies.
The solution conformations of tetrameric and hexameric cyclopeptides containing alternating L-proline and 6-aminopicolinic acid subunits strongly depend on solvent polarity. Whereas in polar solvents, such as d6-DMSO, both peptides prefer on average symmetric conformations with converging NH groups, in less polar chloroform intramolecular hydrogen bonds to the peptide NH groups stabilize other, and in the case of the hexapeptide, non-symmetrical conformations. Independent of the solvent, both peptides interact with anions via their NH groups but whereas anion binding requires a cleavage of the intramolecular hydrogen bonds accompanied by a conformational reorganization in chloroform, in polar solvents the peptides are already well preorganized for anion complexation. Complex formation between anions and the cyclic hexapeptide was even detected in highly competitive D2O/CD3OD or H2O/CH3CN mixtures, which was attributed to the special sandwich-type structure of the complexes formed. Stabilizing these 2:1 aggregates by covalently linking two cyclopeptide rings together affords ditopic receptors with a high anion affinity in protic solvents. Complex stability depends on the structure of the linker with which the two receptor moieties are connected and even more potent anion receptors were obtained by a dynamic combinatorial optimization of this linking unit.
Kubik
Stefan
S
Institut für Organische Chemie und Makromolekulare Chemie, Heinrich-Heine-Universität, Universitätsstr. 1, D-40225 Düsseldorf, Germany. kubik@chemie.uni-kl.de
Goddard
Richard
R
Otto
Sijbren
S
Pohl
Susanne
S
Reyheller
Carsten
C
Stüwe
Sabine
S
D000838:Anions; D001665:Binding Sites; D040761:Biomimetic Materials / Q000032:analysis / Q000737:chemistry*; D020650:Combinatorial Chemistry Techniques / Q000379:methods*; D003198:Computer Simulation; D008958:Models, Molecular; D010455:Peptides / Q000737:chemistry*; D011485:Protein Binding; D011487:Protein Conformation; D020033:Protein Isoforms / Q000737:chemistry*; D011956:Receptors, Cell Surface / Q000737:chemistry*
D000838:Anions; D010455:Peptides; D020033:Protein Isoforms; D011956:Receptors, Cell Surface