title: Detection of processed genetically modified food using CIM monolithic columns for DNA isolation.
abstract: The availability of sufficient quantities of DNA of adequate quality is crucial in polymerase chain reaction (PCR)-based methods for genetically modified food detection. In this work, the suitability of anion-exchange CIM (Convective Interaction Media; BIA Separations, Ljubljana, Slovenia) monolithic columns for isolation of DNA from food was studied. Maize and its derivates corn meal and thermally pretreated corn meal were chosen as model food. Two commercially available CIM disk columns were tested: DEAE (diethylaminoethyl) and QA (quaternary amine). Preliminary separations were performed with standard solution of salmon DNA at different pH values and different NaCl concentrations in mobile phase. DEAE groups and pH 8 were chosen for further isolations of DNA from a complex matrix-food extract. The quality and quantity of isolated DNA were tested on agarose gel electrophoresis, with UV-scanning spectrophotometry, and by amplification with real-time PCR. DNA isolated in this way was of suitable quality for further PCR analyses. The described method is also applicable for DNA isolation from processed foods with decreased DNA content. Furthermore, it is more effective and less time-consuming in comparison with the existing proposed methods for isolation of DNA from plant-derived foods.
authors.affiliation: Department of Food Science and Technology, Biotechnical Faculty, University of Ljubljana, Jamnikarjeva 101, S-1000 Ljubljana, Slovenia.
authors.forename: Sergej
authors.initials: S
authors.lastname: Jerman
authors.forename: Ales
authors.initials: A
authors.lastname: Podgornik
authors.forename: Katarina
authors.initials: K
authors.lastname: Cankar
authors.forename: Neza
authors.initials: N
authors.lastname: Cadet
authors.forename: Mihaela
authors.initials: M
authors.lastname: Skrt
authors.forename: Jana
authors.initials: J
authors.lastname: Zel
authors.forename: Peter
authors.initials: P
authors.lastname: Raspor
mesh_terms: D002852:Chromatography, Ion Exchange / Q000295:instrumentation*; D004247:DNA / Q000302:isolation & purification*; D004587:Electrophoresis, Agar Gel; D030841:Food, Genetically Modified; D016133:Polymerase Chain Reaction; D013056:Spectrophotometry, Ultraviolet
chemical_list: D004247:DNA