MADE4: an R package for multivariate analysis of gene expression data.
MADE4, microarray ade4, is a software package that facilitates multivariate analysis of microarray gene-expression data. MADE4 accepts a wide variety of gene-expression data formats. MADE4 takes advantage of the extensive multivariate statistical and graphical functions in the R package ade4, extending these for application to microarray data. In addition, MADE4 provides new graphical and visualization tools that aid in interpretation of multivariate analysis of microarray data.
Culhane
Aedín C
AC
Bioinformatics, Conway Institute, University College Dublin, Dublin 4, Ireland. aedin.culhane@ucd.ie
Thioulouse
Jean
J
Perrière
Guy
G
Higgins
Desmond G
DG
D000465:Algorithms; D003196:Computer Graphics; D004282:Documentation / Q000379:methods; D020869:Gene Expression Profiling / Q000379:methods*; D005786:Gene Expression Regulation / Q000502:physiology*; D008954:Models, Biological; D015999:Multivariate Analysis; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods*; D010802:Phylogeny; D015398:Signal Transduction / Q000502:physiology; D012984:Software; D014584:User-Computer Interface