title: Effect of humic material on the bacterioplankton community composition in boreal lakes and mesocosms.
abstract: The bacterioplankton community composition in two Finnish forest lakes with different content of humic substances was studied by denaturing gradient gel electrophoresis (DGGE) and sequencing of the major bands. The same dominant bacterial phylotypes were detected in the bacterioplankton communities of clear-water Lake Ahvenlammi and humic Lake Sammalisto. For 4 years, in every water layer, Actinobacteria was the dominant and Verrucomicrobia the second most common phylum. In the hypolimnion, other dominant phyla were also found. We set up a mesocosm experiment to assess the effect of a sudden load of allochthonous humus extract to the bacterioplankton community composition. Changes in the bacterial communities were followed in four control and four humus extract-added mesocosms for 50 days. In the humic mesocosms the phylotypes of allochthonous Proteobacteria arriving with the humus extract were initially prevalent but disappeared during the first weeks. After this the Actinobacteria-dominated communities resembled the bacterioplankton communities of the control mesocosms and Lake Ahvenlammi. Towards the end of the experiment the community patterns in all the mesocosms started to change slightly because of erratic occurrence of new proteobacterial phylotypes. Thus the effects of a sudden load of allochthonous humic material and bacteria to the bacterioplankton community composition were transient.
authors.affiliation: Department of Applied Chemistry and Microbiology, PO Box 56, Viikki Biocenter, 00014 University of Helsinki, Finland. kaisa.haukka@helsinki.fi
authors.forename: Kaisa
authors.initials: K
authors.lastname: Haukka
authors.forename: Erika
authors.initials: E
authors.lastname: Heikkinen
authors.forename: Timo
authors.initials: T
authors.lastname: Kairesalo
authors.forename: Heli
authors.initials: H
authors.lastname: Karjalainen
authors.forename: Kaarina
authors.initials: K
authors.lastname: Sivonen
mesh_terms: D039903:Actinobacteria / Q000235:genetics / Q000302:isolation & purification*; D001483:Base Sequence; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D017753:Ecosystem; D004586:Electrophoresis; D005618:Fresh Water / Q000382:microbiology*; D008969:Molecular Sequence Data; D016133:Polymerase Chain Reaction; D020560:Proteobacteria / Q000235:genetics / Q000302:isolation & purification*; D012336:RNA, Ribosomal, 16S / Q000737:chemistry / Q000235:genetics; D012987:Soil; D014871:Water Microbiology
chemical_list: D004269:DNA, Bacterial; D012336:RNA, Ribosomal, 16S; D012987:Soil