title: The expression of de novo DNA methylase DNMT3b, of the methyl-CpG binding protein MBD2b and of 5-MCDG glycosylase shows two waves of induction during CaCO-2 cell differentiation.
abstract: DNA methylation plays a central role in the control of gene expression during development and cell differentiation, thus DNA methylation and demethylation processes are expected to be strictly regulated during these events. We have explored the expression levels of the genes encoding DNA methylases, methyl-CpG binding proteins and demethylases during in vitro differentiation of human carcinoma colon cells (CaCO-2) used as a model system. The results show that the global DNA methylation pattern remains constant during CaCO-2 cells differentiation indicating that required genome methylation pattern in cell differentiation was already established in the seeded cells. On the contrary, the timing of expression of several of the explored genes is tightly regulated, suggesting they are involved in the regulation of the differentiation program. In particular, the timing of expression of DNMT3b and of MBD2b and 5-MCDG shows two peaks not observed in the time courses of the expression of other genes belonging to the same families. These events, not dependent on the cell cycle synchronization, have apparently no significant impact on the overall methylation status of the genome.
authors.affiliation: Dipartimento di Genetica, Biologia Generale e Molecolare, Università di Napoli Federico II, Italy. digiaimo@unima.it
authors.forename: Rossella
authors.initials: R
authors.lastname: Di Giaimo
authors.forename: Giuseppina M R
authors.initials: GM
authors.lastname: Russo
authors.forename: Maria A
authors.initials: MA
authors.lastname: Bevilacqua
authors.forename: Barbara
authors.initials: B
authors.lastname: Iovine
authors.forename: Rosanna
authors.initials: R
authors.lastname: Del Gaudio
authors.forename: Giuseppe
authors.initials: G
authors.lastname: Geraci
authors.forename: Tommaso
authors.initials: T
authors.lastname: Russo
mesh_terms: D015139:Blotting, Southern; D015153:Blotting, Western; D018938:Caco-2 Cells; D002454:Cell Differentiation / Q000235:genetics*; D004248:DNA (Cytosine-5-)-Methyltransferases / Q000235:genetics* / Q000378:metabolism; D045647:DNA Glycosylases / Q000235:genetics* / Q000378:metabolism; D019175:DNA Methylation; D004273:DNA, Neoplasm / Q000235:genetics / Q000378:metabolism; D004268:DNA-Binding Proteins / Q000235:genetics* / Q000378:metabolism; D015870:Gene Expression / Q000235:genetics*; D006801:Humans; D012333:RNA, Messenger / Q000235:genetics / Q000378:metabolism; D020133:Reverse Transcriptase Polymerase Chain Reaction; D013997:Time Factors; D000097584:DNA Methyltransferase 3B
chemical_list: D004248:DNA (Cytosine-5-)-Methyltransferases; D045647:DNA Glycosylases; D004273:DNA, Neoplasm; D004268:DNA-Binding Proteins; D012333:RNA, Messenger; D000097584:DNA Methyltransferase 3B; C115368:MBD2 protein; C093335:5-methylcytosine-DNA glycosylase