Meta-DP: domain prediction meta-server.
Meta-DP, a domain prediction meta-server provides a simple interface to predict domains in a given protein sequence using a number of domain prediction methods. The Meta-DP is a convenient resource because through accessing a single site, users automatically obtain the results of the various domain prediction methods along with a consensus prediction. The Meta-DP is currently coupled to 10 domain prediction servers and can be extended to include any number of methods. Meta-DP can thus become a centralized repository of available methods. Meta-DP was also used to evaluate the performance of 13 domain prediction methods in the context of CAFASP-DP.


BACKGROUND
The Meta-DP server is freely available at http://meta-dp.bioinformatics.buffalo.edu and the CAFASP-DP evaluation results are available at http://cafasp4.bioinformatics.buffalo.edu/dp/update.html


BACKGROUND
hkaur@bioinformatics.buffalo.edu


BACKGROUND
Available at http://cafasp4.bioinformatics.buffalo.edu/dp/update.html.
Saini
Harpreet Kaur
HK
Center of Excellence in Bioinformatics and Department of Computer Science and Engineering, University at Buffalo, 901 Washington Street, Suite 300, Buffalo, NY 14203, USA. hkaur@bioinformatics.buffalo.edu
Fischer
Daniel
D
D000465:Algorithms; D003196:Computer Graphics; D003198:Computer Simulation; D020407:Internet; D008958:Models, Molecular; D011487:Protein Conformation; D017434:Protein Structure, Tertiary; D011506:Proteins / Q000032:analysis / Q000737:chemistry*; D016415:Sequence Alignment / Q000379:methods*; D020539:Sequence Analysis, Protein / Q000379:methods*; D017386:Sequence Homology, Amino Acid; D012984:Software; D018511:Systems Integration; D014584:User-Computer Interface
D011506:Proteins