Relationship among Lepista species determined by CAPS and RAPD.
To determine the relationship of Australian members of the genus Lepista with those from other parts of the world, genetic variation of isolates representing 27 accessions was assayed by cleaved amplified polymorphic sequences (CAPS) and random amplified polymorphic DNA (RAPD). CAPS and RAPD identified eight and seven groups, respectively. CAPS Groups 1 and 2 and RAPD Group 1 consisted of French and Australian accessions classified as morphospecies L. nuda. CAPS Group 3 and RAPD Groups 2 and 2A consisted of mostly Australian isolates identified as L. sordida var. sordida or L. sordida var. umbonata. Isolates earlier identified as morphospecies L. sp. were also placed in CAPS Group 3 and RAPD Group 2A indicating that these isolates are L. sordida var. sordida. In addition, three smaller groups were distinguished. A French isolate of L. sordida var. sordida was placed in distinctly separate CAPS and RAPD groups to Australian L. sordida var. sordida Groups 4,4 respectively. A French isolate of L. sordida var. aianthina was placed in CAPS and RAPD Groups 3,3. An accession of L. saeva was placed in CAPS Group 6 and RAPD Group 5, separate from other isolates. RAPD Groups 6 and 7 consist, respectively, of Greek and American accessions of L. nuda that were only distantly related to the Australian and French accessions of this morphospecies: CAPS also separated these isolates from each other and from all other isolates. The data suggest that the classification of morphospecies and varieties within Lepista cannot be determined on the basis of morphology alone. The Greek and American accessions of L. nuda are separated from the French and Australian accessions and may not be L. nuda. Similarly, the Australian accessions currently classified as L. sordida var. sordida together with the accessions of L. sordida var. umbonata are distinct from the French accessions of L. sordida var. sordida suggesting that Australian isolates may represent a new species or variety. Further studies using a combination of morphological and genetic characterization are required to provide a more accurate understanding of Lepista species.
Stott
Karen
K
Unité de Recherches sur les Champignons, Institut National de la Recherche Agronomique, 33883 Villenave d'Ornon, Cedex, France. karen_stott@dpiwe.tas.gov.au
Desmerger
Christophe
C
Holford
Paul
P
D000363:Agaricales / Q000145:classification* / Q000235:genetics; D001315:Australia; D004271:DNA, Fungal / Q000032:analysis / Q000302:isolation & purification; D016533:Mycological Typing Techniques; D010802:Phylogeny; D012150:Polymorphism, Restriction Fragment Length; D019105:Random Amplified Polymorphic DNA Technique; D013045:Species Specificity
D004271:DNA, Fungal