title: Molecular cloning and characterisation of a Rab-binding GDP-dissociation inhibitor from Medicago truncatula.
abstract: We have isolated and sequenced the full-length cDNA of a GDP-dissociation inhibitor (GDI) from the model legume Medicago truncatula L. The cDNA (MtGDI) contains an open reading frame of 1335 bp, coding for a protein of 444 amino acids with a calculated molecular mass of 49,785 kDa. The deduced amino acid sequence shows significant homology to other plant GDIs, the highest homology being found to GDI from the legume Cicer arietinum (96% identity). The MtGDI was expressed as a N-terminal FLAG-fusion protein in Escherichia coli BL21 (DE3). Its direct interaction with a small G protein of Rab type from Medicago sativa, MsRab11f, was demonstrated in vitro by co-immunoprecipitation using a peptide-specific antibody raised against MtGDI. The dissociation constant of the MtGDI-MsRab11f complex (4 muM) was determined by a surface plasmon resonance (SPR) assay. Real-time RT-PCR and Western blot analyses suggested that MtGDI is ubiquitously expressed in M. truncatula. High levels of MtGDI mRNA were detected in uninfected roots, leaves and root nodules. In etiolated seedlings and cell cultures, the amount of MtGDI mRNA was much lower. In all tissues tested, the peptide-specific anti-MtGDI antibody detected the expected 50 kDa protein in the total protein extracts. MtGDI was found in the cytosol; however, a significant fraction was associated with the intracellular membranes in seedlings and roots indicating a membrane localisation of the protein. A second immunoreactive band was detected in leaves suggesting that more than one GDI isoform exist in M. truncatula.
authors.affiliation: Department of Genetics, Biology Faculty, University of Bielefeld, Post-Box 100131, 33501 Bielefeld, Germany. Ivanka.Yaneva@genetik.uni-bielefeld.de
authors.forename: Ivanka Asparuhova
authors.initials: IA
authors.lastname: Yaneva
authors.forename: Karsten
authors.initials: K
authors.lastname: Niehaus
mesh_terms: D000595:Amino Acid Sequence; D003001:Cloning, Molecular; D020730:Guanine Nucleotide Dissociation Inhibitors / Q000235:genetics* / Q000378:metabolism; D046913:Medicago truncatula / Q000201:enzymology / Q000235:genetics*; D008969:Molecular Sequence Data; D010940:Plant Proteins / Q000378:metabolism; D011485:Protein Binding / Q000235:genetics / Q000502:physiology; D020691:rab GTP-Binding Proteins / Q000378:metabolism; D062947:rho-Specific Guanine Nucleotide Dissociation Inhibitors
chemical_list: D020730:Guanine Nucleotide Dissociation Inhibitors; D010940:Plant Proteins; C092220:Rab protein, Medicago sativa; D062947:rho-Specific Guanine Nucleotide Dissociation Inhibitors; D020691:rab GTP-Binding Proteins