title: Loop-mediated isothermal amplification method for rapid detection of the periodontopathic bacteria Porphyromonas gingivalis, Tannerella forsythia, and Treponema denticola.
abstract: Loop-mediated isothermal amplification (LAMP), a novel nucleic acid amplification method, was developed for the rapid detection of the major periodontal pathogens Porphyromonas gingivalis, Tannerella forsythia, and Treponema denticola. The LAMP method amplifies DNA with high specificity, efficiency, and rapidity under isothermal conditions using a set of four specially designed primers and a DNA polymerase with strand displacement activity. In this study, we initially designed the primers for LAMP assays to detect these bacteria and evaluated the specificity and sensitivity of these assays. The specificities of the primers for these bacteria were examined using various oral bacteria and various reaction times. The lower detection limits of the 60-min LAMP reaction without loop primers were 1 microg/tube for P. gingivalis, 10 fg/tube for T. forsythia, and 1 ng/tube for T. denticola. Addition of the loop primers for each bacterium improved the detection specificities and sensitivities by several magnitudes. Furthermore, LAMP assays were applied to the rapid detection of these periodontal pathogens in clinical specimens, and the results were compared with those of conventional PCR detection. The results of the LAMP assays corresponded to those of conventional PCR assays. These results indicate that the LAMP assay is an extremely rapid, highly sensitive, specific method. This method is very useful for the rapid detection of periodontopathic bacteria and the diagnosis of periodontal disease.
authors.affiliation: Division of Community Oral Health Science, Kyushu Dental College, 2-6-1 Manazuru, Kitakyushu 803-8580, Japan. akihiro@kyu-dent.ac.jp
authors.forename: Akihiro
authors.initials: A
authors.lastname: Yoshida
authors.forename: Shiori
authors.initials: S
authors.lastname: Nagashima
authors.forename: Toshihiro
authors.initials: T
authors.lastname: Ansai
authors.forename: Masayo
authors.initials: M
authors.lastname: Tachibana
authors.forename: Hiroaki
authors.initials: H
authors.lastname: Kato
authors.forename: Hajime
authors.initials: H
authors.lastname: Watari
authors.forename: Tsugunori
authors.initials: T
authors.lastname: Notomi
authors.forename: Tadamichi
authors.initials: T
authors.lastname: Takehara
mesh_terms: D001438:Bacteroidaceae / Q000235:genetics / Q000302:isolation & purification*; D001483:Base Sequence; D017931:DNA Primers; D004269:DNA, Bacterial / Q000235:genetics / Q000302:isolation & purification; D005784:Gene Amplification; D006801:Humans; D010518:Periodontitis / Q000382:microbiology*; D016966:Porphyromonas gingivalis / Q000235:genetics / Q000302:isolation & purification*; D048373:Treponema denticola / Q000235:genetics / Q000302:isolation & purification*
chemical_list: D017931:DNA Primers; D004269:DNA, Bacterial