title: Improved HIV-1 viral load determination based on reverse transcriptase activity recovered from human plasma.
abstract: A more sensitive version of ExaVir Load, a test that utilizes reverse transcriptase (RT) activity from virions in plasma to determine HIV-1 viral load, is described. The virions were immobilized on a gel that was washed, followed by lysis of the virions, elution of purified RT, and finally RT activity determination. The changes made to the original test were: (1) improved washing of the immobilized virions by addition of a non-lytic detergent to the wash buffer, (2) improved virion lysis procedure, including changes in salt, detergent and pH, (3) the use of larger sample volumes in the RT assay, and (4) prolonged RT reaction time. The alterations gave a tenfold increased sensitivity compared to the original version. The correlation between RT load by the current test and RNA PCR was the same as previously (r=0.90). Using colorimetric product detection, the average detection limit in a panel of 262 patient plasma from Stockholm was 0.5 fg RT/ml, corresponding to approximately 170 RNA copies/ml. None of 54 HIV-1 RNA negative samples exhibited RT. The amount of RT load positive samples were 19% for samples containing 50-400 RNA, 71% for samples with 400-1,500, and 100% among samples with >8,000 copies/ml (according to Roche Amplicor). The sensitivity could be increased further using fluorimetric detection. In conclusion, the modifications of the test described result in an important increase in sensitivity. It can now be regarded as a competitive alternative method for HIV viral load determinations.
authors.affiliation: Department of Genetics and Pathology, Uppsala University, Uppsala, Sweden.
authors.forename: Anders
authors.initials: A
authors.lastname: Malmsten
authors.forename: Xing-Wu
authors.initials: XW
authors.lastname: Shao
authors.forename: Staffan
authors.initials: S
authors.lastname: Sjödahl
authors.forename: Eva-Lena
authors.initials: EL
authors.lastname: Fredriksson
authors.forename: Ingvar
authors.initials: I
authors.lastname: Pettersson
authors.forename: Thomas
authors.initials: T
authors.lastname: Leitner
authors.forename: Clas F R
authors.initials: CF
authors.lastname: Källander
authors.forename: Eric
authors.initials: E
authors.lastname: Sandström
authors.forename: J Simon
authors.initials: JS
authors.lastname: Gronowitz
mesh_terms: D005470:Fluorometry; D015658:HIV Infections / Q000821:virology*; D054303:HIV Reverse Transcriptase / Q000097:blood* / Q000302:isolation & purification; D015497:HIV-1 / Q000502:physiology*; D006801:Humans; D012367:RNA, Viral / Q000097:blood; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity; D013019:South Africa; D013053:Spectrophotometry; D013223:Statistics as Topic; D013548:Sweden; D019562:Viral Load / Q000379:methods*
chemical_list: D012367:RNA, Viral; D054303:HIV Reverse Transcriptase