Numerical study of a binary Yukawa model in regimes characteristic of globular proteins in solutions.
The main goal of this paper is to assess the limits of validity, in the regime of low concentration and strong Coulomb coupling (high molecular charges), of a simple perturbative approximation to the radial distribution functions (RDF's), based upon a low-density expansion of the potential of mean force and proposed to describe protein-protein interactions in a recent small-angle-scattering (SAS) experimental study. A highly simplified Yukawa (screened Coulomb) model of monomers and dimers of a charged globular protein (beta-lactoglobulin) in solution is considered. We test the accuracy of the RDF approximation, as a necessary complementary part of the previous experimental investigation, by comparison with the fluid structure predicted by approximate integral equations and exact Monte Carlo (MC) simulations. In the MC calculations, an Ewald construction for Yukawa potentials has been used to take into account the long-range part of the interactions in the weakly screened cases. Our results confirm that the perturbative first-order approximation is valid for this system even at strong Coulomb coupling, provided that the screening is not too weak (i.e., for Debye length smaller than monomer radius). A comparison of the MC results with integral equation calculations shows that both the hypernetted-chain (HNC) and Percus-Yevick closures have a satisfactory behavior under these regimes, with the HNC being superior throughout. The relevance of our findings for interpreting SAS results is also discussed.
Giacometti
Achille
A
Istituto Nazionale per la Fisica della Materia and Dipartimento di Chimica Fisica, Università di Venezia, Italy.
Gazzillo
Domenico
D
Pastore
Giorgio
G
Das
Tushar Kanti
TK
D001665:Binding Sites; D045424:Complex Mixtures / Q000737:chemistry*; D003198:Computer Simulation; D007782:Lactoglobulins / Q000737:chemistry*; D008956:Models, Chemical; D046912:Multiprotein Complexes / Q000737:chemistry*; D011485:Protein Binding; D017510:Protein Folding; D025941:Protein Interaction Mapping / Q000379:methods*; D012996:Solutions
D045424:Complex Mixtures; D007782:Lactoglobulins; D046912:Multiprotein Complexes; D012996:Solutions