Applying a grid technology to protein structure predictor "ROKKY".
This paper describes a sub-project of BioGrid project called "HTC (High Throughput Computing) group." Generally, a protein structure prediction which requires large amount of computational resources is done by trial-and-error method. HTC group have been developing a high throughput computing system with a flexible workflow handling mechanism for a protein structure prediction. In this paper, we show how to apply our high throughput computing system to the protein structure predictor called "ROKKY."
Fujikawa
Kazutoshi
K
Information Technology Center, Nara Institute of Science and Technology, Japan. fujikawa@itc.naist.jp
Jin
Wenzhen
W
Park
Sung-Joon
SJ
Furuta
Tadaomi
T
Takada
Shoji
S
Arikawa
Hiroshi
H
Date
Susumu
S
Shimojo
Shinji
S
D019295:Computational Biology; D003198:Computer Simulation; D003199:Computer Systems; D006801:Humans; D007564:Japan; D011487:Protein Conformation; D020539:Sequence Analysis, Protein; D014584:User-Computer Interface