title: Charge transfer in DNA: hole charge is confined to a single base pair due to solvation effects.
abstract: We include solvation effects in tight-binding Hamiltonians for hole states in DNA. The corresponding linear-response parameters are derived from accurate estimates of solvation energy calculated for several hole charge distributions in DNA stacks. Two models are considered: (A) the correction to a diagonal Hamiltonian matrix element depends only on the charge localized on the corresponding site and (B) in addition to this term, the reaction field due to adjacent base pairs is accounted for. We show that both schemes give very similar results. The effects of the polar medium on the hole distribution in DNA are studied. We conclude that the effects of polar surroundings essentially suppress charge delocalization in DNA, and hole states in (GC)(n) sequences are localized on individual guanines.
authors.affiliation: Institució Catalana de Recerca i Estudis Avançats, Universitat de Girona, 17071 Girona, Spain. alexander.voityuk@icrea.es
authors.forename: Alexander A
authors.initials: AA
authors.lastname: Voityuk
mesh_terms: D001482:Base Composition; D020029:Base Pairing; D003198:Computer Simulation; D004247:DNA / Q000737:chemistry*; D008956:Models, Chemical; D008958:Models, Molecular; D008968:Molecular Conformation; D009711:Nucleotides / Q000737:chemistry*; D012997:Solvents / Q000737:chemistry*; D055672:Static Electricity
chemical_list: D009711:Nucleotides; D012997:Solvents; D004247:DNA