title: pyd genes of Rhizobium sp. strain TAL1145 are required for degradation of 3-hydroxy-4-pyridone, an aromatic intermediate in mimosine metabolism.
abstract: Rhizobium sp. strain TAL1145 degrades the Leucaena toxin mimosine and its degradation product 3-hydroxy-4-pyridone (HP). The aim of this investigation is to characterize the Rhizobium genes for HP degradation and transport. These genes were localized by subcloning and mutagenesis on a previously isolated cosmid, pUHR263, containing mid genes of TAL1145 required for mimosine degradation. Two structural genes, pydA and pydB, encoding a metacleavage dioxygenase and a hydrolase, respectively, are required for degradation of HP, and three genes, pydC, pydD, and pydE, encoding proteins of an ABC transporter, are involved in the uptake of HP by TAL1145. These genes are induced by HP, although both pydA and pydB show low levels of expression without HP. pydA and pydB are cotranscribed, while pydC, pydD, and pydE are each transcribed from separate promoters. PydA and PydB show no homology with other dioxygenases and hydrolases in Sinorhizobium meliloti, Mesorhizobium loti, and Bradyrhizobium japonicum. Among various root nodule bacteria, the ability to degrade mimosine or HP is unique to some Leucaena-nodulating Rhizobium strains.
authors.affiliation: Department of Molecular Biosciences & Bioengineering, University of Hawaii at Manoa, 1955 East-West Road, Honolulu, HI 96822, USA.
authors.forename: Jonathan D
authors.initials: JD
authors.lastname: Awaya
authors.forename: Paul M
authors.initials: PM
authors.lastname: Fox
authors.forename: Dulal
authors.initials: D
authors.lastname: Borthakur
mesh_terms: D018528:ATP-Binding Cassette Transporters / Q000378:metabolism; D049308:Dioxygenases / Q000235:genetics*; D006867:Hydrolases / Q000235:genetics*; D008898:Mimosine / Q000378:metabolism*; D008969:Molecular Sequence Data; D009876:Operon; D011728:Pyridones / Q000737:chemistry / Q000378:metabolism*; D012231:Rhizobium / Q000235:genetics* / Q000378:metabolism; D017421:Sequence Analysis
chemical_list: D018528:ATP-Binding Cassette Transporters; D011728:Pyridones; C020366:3-hydroxy-4-pyridone; D008898:Mimosine; D049308:Dioxygenases; D006867:Hydrolases