Querying and computing with BioCyc databases.
We describe multiple methods for accessing and querying the complex and integrated cellular data in the BioCyc family of databases: access through multiple file formats, access through Application Program Interfaces (APIs) for LISP, Perl and Java, and SQL access through the BioWarehouse relational database.
Krummenacker
Markus
M
SRI International, Bioinformatics Research Group, EK207 Menlo Park, CA 94025, USA.
Paley
Suzanne
S
Mueller
Lukas
L
Yan
Thomas
T
Karp
Peter D
PD
D003628:Database Management Systems; D016208:Databases, Factual; D005786:Gene Expression Regulation / Q000502:physiology*; D016247:Information Storage and Retrieval / Q000379:methods*; D008954:Models, Biological; D015398:Signal Transduction / Q000502:physiology*; D012984:Software; D014584:User-Computer Interface