Phylogenetic analysis of the major capsid protein gene of iridovirus isolates from cultured flounders Paralichthys olivaceus in Korea.
In 2003, 13 isolates of iridovirus were obtained from cultured flounders Paralichthys olivaceus during epizootics in Korea. The full open reading frames (ORFs) encoding the major capsid protein (MCP) (1362 bp) from the 13 flounder iridoviruses (FLIVs) were sequenced and the deduced amino acid sequences were phylogenetically analyzed. Phylogenetic analysis of the MCP revealed that all 13 FLIVs were the same species as rock bream iridovirus (RBIV), red sea bream iridovirus (RSIV), and infectious spleen and kidney necrosis virus (ISKNV), and were grouped into an unknown genus which was different from the 2 genera known to infect fish, Ranavirus and Lymphocystivirus. This is the first report on the isolation and phylogenetic analysis of the iridovirus of unknown genus from flounders during epizootics.
Do
Jeong Wan
JW
Pathology Division, National Fisheries Research & Development Institute, Kijang, Busan 619-902, Korea.
Cha
Seung Ju
SJ
Kim
Jong Su
JS
An
Eun Jeong
EJ
Lee
Nam Sil
NS
Choi
Hee Jung
HJ
Lee
Chan Hwei
CH
Park
Mi Seon
MS
Kim
Jin Woo
JW
Kim
Yi Cheong
YC
Park
Jeong Woo
JW
D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D036022:Capsid Proteins / Q000235:genetics*; D016000:Cluster Analysis; D017931:DNA Primers; D004266:DNA Virus Infections / Q000662:veterinary*; D005393:Fish Diseases / Q000821:virology*; D005432:Flounder; D007497:Iridoviridae / Q000145:classification / Q000235:genetics*; D007723:Korea; D046529:Microscopy, Electron, Transmission; D008969:Molecular Sequence Data; D010802:Phylogeny; D017422:Sequence Analysis, DNA; D017385:Sequence Homology; D013045:Species Specificity; D013154:Spleen / Q000648:ultrastructure / Q000821:virology
D036022:Capsid Proteins; D017931:DNA Primers