Comparative EST analyses in plant systems.
Expressed sequence tag (EST) data are a major contributor to the known plant sequence space. Organization of the data into non-redundant clusters representing tentative unique genes provides snapshots of the gene repertoires of a species. This chapter reviews availability of sequences and sequence analysis results and describes several resources and tools that should facilitate broad-based utilization of EST data for gene structure annotation, gene discovery, and comparative genomics.
Dong
Qunfeng
Q
Department of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa 50011-3260, USA.
Kroiss
Lori
L
Oakley
Fredrick D
FD
Wang
Bing-Bing
BB
Brendel
Volker
V
D017398:Alternative Splicing; D001483:Base Sequence; D017124:Conserved Sequence; D018076:DNA, Complementary / Q000235:genetics; D018744:DNA, Plant / Q000235:genetics; D030541:Databases, Genetic; D020224:Expressed Sequence Tags; D015723:Gene Library; D017343:Genes, Plant; D023281:Genomics / Q000379:methods; D008969:Molecular Sequence Data; D005810:Multigene Family; D010944:Plants / Q000235:genetics*; D016415:Sequence Alignment / Q000379:methods
D018076:DNA, Complementary; D018744:DNA, Plant