Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses.
MapMan is a user-driven tool that displays large genomics datasets onto diagrams of metabolic pathways or other processes. Here, we present new developments, including improvements of the gene assignments and the user interface, a strategy to visualize multilayered datasets, the incorporation of statistics packages, and extensions of the software to incorporate more biological information including visualization of corresponding genes and horizontal searches for similar global responses across large numbers of arrays.
Usadel
Björn
B
Max Planck Institute of Molecular Plant Physiology, 14476 Golm, Germany. usadel@mpimp-golm.mpg.de
Nagel
Axel
A
Thimm
Oliver
O
Redestig
Henning
H
Blaesing
Oliver E
OE
Palacios-Rojas
Natalia
N
Selbig
Joachim
J
Hannemann
Jan
J
Piques
Maria Conceição
MC
Steinhauser
Dirk
D
Scheible
Wolf-Rüdiger
WR
Gibon
Yves
Y
Morcuende
Rosa
R
Weicht
Daniel
D
Meyer
Svenja
S
Stitt
Mark
M
D017343:Genes, Plant; D018745:Genome, Plant; D020411:Oligonucleotide Array Sequence Analysis