title: Feature point tracking and trajectory analysis for video imaging in cell biology.
abstract: This paper presents a computationally efficient, two-dimensional, feature point tracking algorithm for the automated detection and quantitative analysis of particle trajectories as recorded by video imaging in cell biology. The tracking process requires no a priori mathematical modeling of the motion, it is self-initializing, it discriminates spurious detections, and it can handle temporary occlusion as well as particle appearance and disappearance from the image region. The efficiency of the algorithm is validated on synthetic video data where it is compared to existing methods and its accuracy and precision are assessed for a wide range of signal-to-noise ratios. The algorithm is well suited for video imaging in cell biology relying on low-intensity fluorescence microscopy. Its applicability is demonstrated in three case studies involving transport of low-density lipoproteins in endosomes, motion of fluorescently labeled Adenovirus-2 particles along microtubules, and tracking of quantum dots on the plasma membrane of live cells. The present automated tracking process enables the quantification of dispersive processes in cell biology using techniques such as moment scaling spectra.
authors.affiliation: Institute of Computational Science, ETH Zürich, 8092 Zürich, Switzerland. sbalzarini@inf.ethz.ch
authors.forename: I F
authors.initials: IF
authors.lastname: Sbalzarini
authors.forename: P
authors.initials: P
authors.lastname: Koumoutsakos
mesh_terms: D000256:Adenoviridae; D000465:Algorithms; D000818:Animals; D001695:Biology / Q000379:methods*; D002460:Cell Line; D002462:Cell Membrane; D003198:Computer Simulation; D011992:Endosomes / Q000737:chemistry; D005456:Fluorescent Dyes; D006801:Humans; D007091:Image Processing, Computer-Assisted; D008077:Lipoproteins, LDL / Q000378:metabolism; D008856:Microscopy, Fluorescence; D018715:Microscopy, Video; D008870:Microtubules / Q000821:virology; D010316:Particle Size; D011120:Polyomavirus
chemical_list: D005456:Fluorescent Dyes; D008077:Lipoproteins, LDL