title: Genetic polymorphisms and the effect of cigarette smoking in the comet assay.
abstract: A potential genotoxic effect of cigarette smoking has repeatedly been investigated with the comet assay (alkaline single cell gel electrophoresis) and conflicting results have been reported. Besides differences in the methodology and the study design used, genetic differences between the subjects investigated might contribute to the variability of test results. Considering genetic polymorphisms of genes involved in metabolism or DNA repair has led to a better discrimination of smoking-related genotoxic effects in some cases but also led to discrepant results. We therefore evaluated our baseline comet assay effects obtained for nonsmokers and smokers in relation to selected genetic polymorphisms. Our study group comprised 52 nonsmokers and 51 smokers who were strictly selected to exclude potential confounding factors. We chose polymorphisms in the genes GSTM1 and CYP1A1 (Ile462Val) because they take part in the metabolism of genotoxins contained in tobacco smoke. In a subgroup of 32 nonsmokers and 31 smokers we also studied polymorphisms in XPD (Lys751Gln), XRCC1 (Arg399Gln) and XRCC3 (Thr241Val) because they are part of DNA repair pathways involved in the repair of tobacco-related DNA damage. Freshly collected peripheral whole blood samples were tested in the alkaline (pH > 13) comet assay. In all experiments a reference standard (untreated V79 cells) was included to correct for assay variability. An independent second evaluation was carried out for all experiments. None of these approaches revealed a significant difference between nonsmokers and smokers.
authors.affiliation: Universitätsklinikum Ulm, Abteilung Humangenetik, D-89070 Ulm, Germany.
authors.forename: Heike
authors.initials: H
authors.lastname: Hoffmann
authors.forename: Caroline
authors.initials: C
authors.lastname: Isner
authors.forename: Josef
authors.initials: J
authors.lastname: Högel
authors.forename: Günter
authors.initials: G
authors.lastname: Speit
mesh_terms: D020552:Comet Assay; D019363:Cytochrome P-450 CYP1A1 / Q000235:genetics; D004265:DNA Helicases / Q000235:genetics; D004260:DNA Repair / Q000235:genetics*; D004268:DNA-Binding Proteins / Q000235:genetics; D005982:Glutathione Transferase / Q000235:genetics; D006801:Humans; D008658:Inactivation, Metabolic / Q000235:genetics; D009153:Mutagens / Q000378:metabolism; D011110:Polymorphism, Genetic; D012907:Smoking / Q000235:genetics*; D014157:Transcription Factors / Q000235:genetics; D000076105:X-ray Repair Cross Complementing Protein 1; D051759:Xeroderma Pigmentosum Group D Protein
chemical_list: D019363:Cytochrome P-450 CYP1A1; D004265:DNA Helicases; D004268:DNA-Binding Proteins; D005982:Glutathione Transferase; D009153:Mutagens; D014157:Transcription Factors; D000076105:X-ray Repair Cross Complementing Protein 1; D051759:Xeroderma Pigmentosum Group D Protein; C110901:X-ray repair cross complementing protein 3; C000619371:XRCC1 protein, human; C497292:ERCC2 protein, human