title: Vibrational spectrum of glycine molecule.
abstract: The infrared and Raman spectra of glycine molecule has been studied in spectral region 400-4000 cm(-1) in solid form as well as in water. The vibrational frequencies for the fundamental modes of the glycine in neutral and its zwitterionic form have also been calculated using AM1 semiempirical method as well as ab initio method with minimal basis set. The reliability of the minimal basis set and AM1 method with higher basis sets, for IR spectra of the neutral glycine conformers were examined. We find that the 6-21G basis set calculation yields structural parameters, rotational constant and dipole moment of glycine conformers, which are very similar to those obtained from extended basis set calculation as well as experimental values. IR frequencies for glycine conformer I are also calculated in water using SCRF=PCM model and compared with experimental values. A comparison between calculated frequencies for neutral glycine, and its zwitterionic form with observed IR and Raman bands have been made. The total energies for gas phase glycine and its zwitterionic form along with those of hydrated forms were also calculated. It is found from the calculations that in the gas phase neutral glycine is more stable as compared to its zwitterionic form.
authors.affiliation: Laser and Spectroscopy Laboratory, Department of Physics, BHU, Varanasi 221 005, India.
authors.forename: Santosh
authors.initials: S
authors.lastname: Kumar
authors.forename: Amareshwar K
authors.initials: AK
authors.lastname: Rai
authors.forename: V B
authors.initials: VB
authors.lastname: Singh
authors.forename: S B
authors.initials: SB
authors.lastname: Rai
mesh_terms: D005998:Glycine / Q000737:chemistry*; D008958:Models, Molecular; D008968:Molecular Conformation; D013055:Spectrophotometry, Infrared; D013059:Spectrum Analysis, Raman; D013816:Thermodynamics; D014732:Vibration; D014867:Water / Q000737:chemistry
chemical_list: D014867:Water; D005998:Glycine