title: Gene cloning and functional analysis of glycosaminoglycan-degrading enzyme chondroitin AC lyase from Flavobacterium columnare G4.
abstract: The chondroitin AC lyase gene, cslA, was cloned for the first time from the fish bacterial pathogen F. columnare G4. From the first transcription initiation site, the cslA extends 2620 nucleotides to the end of the 3' region. The open reading frame of cslA transcript has 2286 nucleotides encoding 762 amino acids with a 16 residues long signal peptide at the N-terminus. The gene, cslA was then successfully expressed in Escherichia coli and recombinant chondroitin AC lyase, rChonAC was purified, with its lytic activity analyzed. Zymography analysis copolymerized with chondroitin sulphate revealed the lytic activity of rChonAC and also the crude native ChonAC isolated from periplamic space of cultured F. columnare G4. The low level of lytic activity observed in crude native ChonAC may be due possibly to the low level of expression of this gene in the cultured condition. The expression and the role of this virulence factor is of interest for further research on the pathogenesis of F. columnare.
authors.affiliation: State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, Hubei Province, 430072, People's Republic of China.
authors.forename: Hai X
authors.initials: HX
authors.lastname: Xie
authors.forename: P
authors.initials: P
authors.lastname: Nie
authors.forename: M X
authors.initials: MX
authors.lastname: Chang
authors.forename: Y
authors.initials: Y
authors.lastname: Liu
authors.forename: W J
authors.initials: WJ
authors.lastname: Yao
mesh_terms: D000595:Amino Acid Sequence; D002808:Chondroitin Lyases / Q000235:genetics* / Q000378:metabolism; D003001:Cloning, Molecular; D004926:Escherichia coli / Q000201:enzymology; D005417:Flavobacterium / Q000201:enzymology* / Q000235:genetics / Q000254:growth & development; D006025:Glycosaminoglycans / Q000378:metabolism*; D008969:Molecular Sequence Data
chemical_list: D006025:Glycosaminoglycans; D002808:Chondroitin Lyases