title: Construction, detection and microarray analysis on the Shigella flexneri 2a sitC mutant.
abstract: In order to overcome the defects of difficult gene operations in low-copy suicide plasmid pCVD442, Gateway technology was applied in the construction process of recombinant plasmid for gene knockout in this study. With this improved knockout system, we inactivated sitC gene, which is associated with iron transport in Shigella flexneri 2a strain 301, to yield the mutant, MTS. The functional detection of the mutant was performed at the level of culture medium, cell and animal experiment, respectively. The gene expression profiles were compared with DNA microarray between the mutant and the wild type under iron-restricted conditions. The results showed that MTS grew obviously less well than the wild-type strains in L broth containing 150 micromol/L iron chelator DIP (2,2'-dipyridyl). Addition of iron or manganese to the cultures stimulated the growth of MTS to wild-type levels in rich culture medium. In either the experiment on the ability of intracellular multiplication and cell-to-cell spread in HeLa and U937 cell lines, or the experiment on keratoconjunctivitis in guinea pigs, MTS showed no obvious changes in virulence compared with the parental strain Sf301. When 65 micromol/L DIP was added to the cultured HeLa cells, the ability of intracellular multiplication of MTS reduced about 51.6% as compared with that of Sf301. The analysis of expression profiles under iron-limited condition showed that MTS was more sensitive for the change of iron deficiency than Sf301. There are 106 more up-regulated genes in MTS than in wild-type strains, which are involved in membrane transportation, amino acid metabolism and uncategorized function genes, while down-regulated genes are mainly involved in energy and carbohydrate metabolism. Under low iron conditions, the expression levels of known iron-transport associated genes generally increased. Additionally, the number of these genes and their increase amplitude in MTS are more than those in Sf301. Together, these results confirmed that Sit iron-transport system is important for the growth of Shigella.
authors.affiliation: State Key Laboratory for Molecular Virology and Genetic Engineering, Beijing 100176, China.
authors.forename: Moqing
authors.initials: M
authors.lastname: Liu
authors.forename: Hongt
authors.initials: H
authors.lastname: Liu
authors.forename: Lilian
authors.initials: L
authors.lastname: Sun
authors.forename: Jie
authors.initials: J
authors.lastname: Dong
authors.forename: Ying
authors.initials: Y
authors.lastname: Xue
authors.forename: Shuxia
authors.initials: S
authors.lastname: Chen
authors.forename: Qi
authors.initials: Q
authors.lastname: Jin
mesh_terms: D018528:ATP-Binding Cassette Transporters / Q000235:genetics; D000818:Animals; D001426:Bacterial Proteins / Q000235:genetics*; D004405:Dysentery, Bacillary / Q000382:microbiology; D005296:Ferrous Compounds / Q000494:pharmacology; D020869:Gene Expression Profiling; D015964:Gene Expression Regulation, Bacterial / Q000187:drug effects; D006168:Guinea Pigs; D006367:HeLa Cells; D006801:Humans; D007637:Keratoconjunctivitis / Q000382:microbiology; D009154:Mutation; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods*; D009876:Operon / Q000235:genetics; D010957:Plasmids / Q000235:genetics; D015203:Reproducibility of Results; D012763:Shigella flexneri / Q000187:drug effects / Q000235:genetics* / Q000472:pathogenicity; D020298:U937 Cells; D014774:Virulence / Q000235:genetics
chemical_list: D018528:ATP-Binding Cassette Transporters; D001426:Bacterial Proteins; D005296:Ferrous Compounds