title: Canonical labeling of proteome maps.
abstract: We propose a canonical labeling of proteome maps, which enables one to sort and catalog the maps in a simple way. The canonical label of a proteome map is based on the canonical labeling of vertexes of Hasse diagram embedded in the map resulting in the adjacency matrix, the rows of which when viewed as binary numbers are the smallest possible such numbers. The use of the approach in documentation is illustrated with the proteome maps of liver cells of healthy male Fisher F344 rats and the rats treated with different peroxisome proliferators.
authors.affiliation: National Institute of Chemistry, P.O. Box 3430, 1001 Ljubljana, Slovenia, The Ruder Bosković Institute, P.O. Box 180, HR-10002 Zagreb, Croatia. mrandic@msn.com
authors.forename: Milan
authors.initials: M
authors.lastname: Randić
authors.forename: Nella
authors.initials: N
authors.lastname: Lers
authors.forename: Damir
authors.initials: D
authors.lastname: Vukicević
authors.forename: Dejan
authors.initials: D
authors.lastname: Plavsić
authors.forename: Brian D
authors.initials: BD
authors.lastname: Gute
authors.forename: Subhash C
authors.initials: SC
authors.lastname: Basak
mesh_terms: D000465:Algorithms; D000818:Animals; D022781:Hepatocytes / Q000737:chemistry; D008297:Male; D008962:Models, Theoretical; D020543:Proteome; D051381:Rats; D011916:Rats, Inbred F344; D013223:Statistics as Topic / Q000379:methods*
chemical_list: D020543:Proteome