Graphical approach to analyzing DNA sequences.
Recently, we proposed a 2D graphical representation of DNA sequence [J Comput Chem 25(2004) 1364-1368]. Based on this representation, we outline one approach to search optimal alignment. We also can judge the mutations between bases and an unknown sequence based on its graph and a known sequence's graph.
Liao
Bo
B
School of Computer and Communication, Hunan University, Changsha Hunan 410082, People's Republic of China. dragonbw@163.com
Ding
Kequan
K
D000465:Algorithms; D003198:Computer Simulation; D004247:DNA / Q000737:chemistry*; D008958:Models, Molecular; D009154:Mutation; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA / Q000379:methods*
D004247:DNA