title: Automated correction of spin-history related motion artefacts in fMRI: simulated and phantom data.
abstract: This paper concerns the problem of correcting spin-history artefacts in fMRI data. We focus on the influence of through-plane motion on the history of magnetization. A change in object position will disrupt the tissue's steady-state magnetization. The disruption will propagate to the next few acquired volumes until a new steady state is reached. In this paper we present a simulation of spin-history effects, experimental data, and an automatic two-step algorithm for detecting and correcting spin-history artefacts. The algorithm determines the steady-state distribution of all voxels in a given slice and indicates which voxels need a spin-history correction. The spin-history correction is meant to be applied before standard realignment procedures. To obtain experimental data a special phantom and an MRI compatible motion system were designed. The effect of motion on spin-history is presented for data obtained using this phantom inside a 1.5-T MRI scanner. We show that the presented algorithm is capable of detecting the occurrence of a displacement, and it determines which voxels need a spin-history correction. The results of the phantom study show good agreement with the simulations.
authors.affiliation: Institute for Mathematics and Computing Science, University of Groningen, 9700 AV, Groningen, The Netherlands.
authors.forename: Lucian
authors.initials: L
authors.lastname: Muresan
authors.forename: Remco
authors.initials: R
authors.lastname: Renken
authors.forename: Jos B T M
authors.initials: JB
authors.lastname: Roerdink
authors.forename: Hendrikus
authors.initials: H
authors.lastname: Duifhuis
mesh_terms: D000465:Algorithms; D016477:Artifacts; D001185:Artificial Intelligence; D001921:Brain / Q000033:anatomy & histology / Q000502:physiology*; D003198:Computer Simulation; D006801:Humans; D007089:Image Enhancement / Q000379:methods*; D007090:Image Interpretation, Computer-Assisted / Q000379:methods*; D016247:Information Storage and Retrieval / Q000379:methods; D008279:Magnetic Resonance Imaging / Q000295:instrumentation / Q000379:methods*; D008954:Models, Biological; D009068:Movement; D019047:Phantoms, Imaging; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity