title: Protein "fingerprinting" in complex mixtures with peptoid microarrays.
abstract: We report here that microarrays comprised of several thousand peptoids (oligo-N-substituted glycines) are useful tools for the identification of proteins via a "fingerprinting" approach. By using maltose-binding protein, glutathione S-transferase, and ubiquitin, a specific and highly reproducible pattern of binding was observed when fluorescently labeled protein was hybridized to the array. A similar pattern was obtained when binding of an unlabeled protein to the array was visualized by secondary hybridization of a labeled antibody against that protein, showing that native proteins can be identified without the requirement for prior chemical labeling. This work suggests that small-molecule microarrays might be used for more complex fingerprinting assays of potential diagnostic value.
authors.affiliation: Department of Internal Medicine, Division of Translational Research, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9185, USA.
authors.forename: M Muralidhar
authors.initials: MM
authors.lastname: Reddy
authors.forename: Thomas
authors.initials: T
authors.lastname: Kodadek
mesh_terms: D000906:Antibodies / Q000276:immunology; D015394:Molecular Structure; D034442:N-substituted Glycines / Q000737:chemistry* / Q000378:metabolism; D019151:Peptide Library; D010449:Peptide Mapping / Q000379:methods*; D040081:Protein Array Analysis / Q000379:methods*; D011485:Protein Binding; D011506:Proteins / Q000737:chemistry / Q000378:metabolism; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity
chemical_list: D000906:Antibodies; D034442:N-substituted Glycines; D019151:Peptide Library; D011506:Proteins