title: Polyphasic study of Chryseobacterium strains isolated from diseased aquatic animals.
abstract: Members of most Chryseobacterium species occur in aquatic environments or food products, while strains of some other species are pathogenic to humans and animals. A collection of 52 Chryseobacterium sp. strains isolated from diseased fish, one frog isolate and 22 reference strains were included in a polyphasic taxonomy study. Fourteen clusters of strains were delineated following the comparison of whole-cell protein profiles. Most of these clusters were confirmed when the phenotypic and RAPD profiles and the 16S rRNA gene sequences were compared. Fatty acid composition helped differentiate the Chryseobacterium strains from members of related genera. None of the fish isolates could be allocated to the two species previously reported from fish but two isolates belonged to C. joostei, while the frog isolate was identified as Elizabethkingia meningoseptica, a human pathogen previously included in the genus Chryseobacterium. Three clusters grouping from 3 to 13 isolates will probably constitute the core of new Chryseobacterium species but all other isolates occupied separate or uncertain positions in the genus. This study further demonstrated the overall high similarity displayed by most Chryseobacterium strains whatever the technique used and the resulting difficulty in delineating new species in the genus. Members of this bacterial group should be considered potential emergent pathogens in various fish and frog species, farming conditions and geographical areas.
authors.affiliation: Institut National de la Recherche Agronomique, Unité de Virologie et Immunologie Moléculaires, Jouy-en-Josas, France. jean-francois.bernardet@jouy.inra.fr
authors.forename: J F
authors.initials: JF
authors.lastname: Bernardet
authors.forename: M
authors.initials: M
authors.lastname: Vancanneyt
authors.forename: O
authors.initials: O
authors.lastname: Matte-Tailliez
authors.forename: L
authors.initials: L
authors.lastname: Grisez
authors.forename: P
authors.initials: P
authors.lastname: Tailliez
authors.forename: C
authors.initials: C
authors.lastname: Bizet
authors.forename: M
authors.initials: M
authors.lastname: Nowakowski
authors.forename: B
authors.initials: B
authors.lastname: Kerouault
authors.forename: J
authors.initials: J
authors.lastname: Swings
mesh_terms: D000818:Animals; D001001:Anura / Q000382:microbiology*; D015373:Bacterial Typing Techniques; D045247:Chryseobacterium / Q000145:classification* / Q000302:isolation & purification / Q000502:physiology; D004269:DNA, Bacterial / Q000737:chemistry; D004591:Electrophoresis, Polyacrylamide Gel; D005227:Fatty Acids / Q000032:analysis; D005393:Fish Diseases / Q000382:microbiology*; D005399:Fishes; D045826:Flavobacteriaceae Infections / Q000382:microbiology / Q000662:veterinary*; D005798:Genes, Bacterial; D020459:Genes, rRNA; D010641:Phenotype; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D019105:Random Amplified Polymorphic DNA Technique
chemical_list: D004269:DNA, Bacterial; D005227:Fatty Acids; D012336:RNA, Ribosomal, 16S