Amycolatopsis plumensis sp. nov., a novel bioactive actinomycete isolated from a New-Caledonian brown hypermagnesian ultramafic soil.
The taxonomic position of an actinomycete isolated from a brown hypermagnesian ultramafic soil was examined using a polyphasic approach. The organism, which was designated SBHS Strp1(T), was found to have chemical and morphological properties typical of Amycolatopsis strains. It was most closely associated with Amycolatopsis kentuckyensis, Amycolatopsis lexingtonensis, Amycolatopsis rifamycinica, Amycolatopsis pretoriensis and Amycolatopsis tolypomycina on the basis of 16S rRNA gene sequence data, and showed a unique pattern of phenotypic properties that distinguished it from the type strains of these taxa. The combined genotypic and phenotypic data show that the organism merits description as a novel species of Amycolatopsis. The name proposed for the novel species is Amycolatopsis plumensis sp. nov.; the type strain is SBHS Strp1(T) (=DSM 44776(T)=NRRL B-24324(T)).
Saintpierre-Bonaccio
Danielle
D
Laboratoire de Biologie et Physiologie Végétales Appliquées, Université de la Nouvelle-Calédonie, BP4477 98847, Nouméa, New Caledonia.
Amir
Hamid
H
Laboratoire de Biologie et Physiologie Végétales Appliquées, Université de la Nouvelle-Calédonie, BP4477 98847, Nouméa, New Caledonia.
Pineau
René
R
Laboratoire de Biologie et Physiologie Végétales Appliquées, Université de la Nouvelle-Calédonie, BP4477 98847, Nouméa, New Caledonia.
Tan
G Y Annie
GYA
School of Biology, University of Newcastle, Newcastle upon Tyne NE1 7RU, UK.
Goodfellow
Michael
M
School of Biology, University of Newcastle, Newcastle upon Tyne NE1 7RU, UK.
D000192:Actinomycetales / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification / Q000502:physiology*; D015373:Bacterial Typing Techniques; D004269:DNA, Bacterial / Q000032:analysis; D004275:DNA, Ribosomal / Q000032:analysis; D020459:Genes, rRNA; D005838:Genotype; D008274:Magnesium; D008969:Molecular Sequence Data; D009510:New Caledonia; D010641:Phenotype; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D017422:Sequence Analysis, DNA; D012987:Soil / Q000032:analysis; D012988:Soil Microbiology
D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D012336:RNA, Ribosomal, 16S; D012987:Soil; D008274:Magnesium