title: Molecular epidemiological study of Arctic rabies virus isolates from Greenland and comparison with isolates from throughout the Arctic and Baltic regions.
abstract: We report a molecular epidemiological study of rabies in Arctic countries by comparing a panel of novel Greenland isolates to a larger cohort of viral sequences from both Arctic and Baltic regions. Rabies virus isolates originating from wildlife (Arctic/red foxes, raccoon-dogs and reindeer), from domestic animals (dogs/cats) and from two human cases were investigated. The resulting 400 bp N-gene sequences were compared with isolates representing neighbouring Arctic or Baltic countries from North America, the former Soviet Union and Europe. Phylogenetic analysis demonstrated similarities between sequences from the Arctic and Arctic-like viruses, which were distinct from rabies isolates originating in the Baltic region of Europe, the Steppes in Russia and from North America. The Arctic-like group consist of isolates from India, Pakistan, southeast Siberia and Japan. The Arctic group was differentiated into two lineages, Arctic 1 and Arctic 2, with good bootstrap support. Arctic 1 is mainly comprised of Canadian isolates with a single fox isolate from Maine in the USA. Arctic 2 was further divided into sub-lineages: 2a/2b. Arctic 2a comprises isolates from the Arctic regions of Yakutia in northeast Siberia and Alaska. Arctic 2b isolates represent a biotype, which is dispersed throughout the Arctic region. The broad distribution of rabies in the Arctic regions including Greenland, Canada and Alaska provides evidence for the movement of rabies across borders.
authors.affiliation: Rabies Research and Diagnostic Group, Veterinary Laboratories Agency, VLA, Weybridge, WHO Collaborating Centre for the Characterisation of Rabies and Rabies-Related Viruses, New Haw, Addlestone, Surrey KT15 3NB, UK.
authors.forename: K L
authors.initials: KL
authors.lastname: Mansfield
authors.forename: V
authors.initials: V
authors.lastname: Racloz
authors.forename: L M
authors.initials: LM
authors.lastname: McElhinney
authors.forename: D A
authors.initials: DA
authors.lastname: Marston
authors.forename: N
authors.initials: N
authors.lastname: Johnson
authors.forename: L
authors.initials: L
authors.lastname: Rønsholt
authors.forename: L S
authors.initials: LS
authors.lastname: Christensen
authors.forename: E
authors.initials: E
authors.lastname: Neuvonen
authors.forename: A D
authors.initials: AD
authors.lastname: Botvinkin
authors.forename: C E
authors.initials: CE
authors.lastname: Rupprecht
authors.forename: A R
authors.initials: AR
authors.lastname: Fooks
mesh_terms: D000818:Animals; D001110:Arctic Regions; D001454:Baltic States; D002415:Cats; D004285:Dogs; D005589:Foxes / Q000821:virology; D006116:Greenland; D006801:Humans; D017720:Molecular Epidemiology; D019590:Nucleocapsid Proteins / Q000235:genetics; D010802:Phylogeny; D012367:RNA, Viral / Q000235:genetics; D011818:Rabies / Q000662:veterinary / Q000821:virology*; D011820:Rabies virus / Q000145:classification / Q000235:genetics* / Q000302:isolation & purification*; D046031:Raccoon Dogs / Q000821:virology; D012053:Reindeer / Q000821:virology; D020133:Reverse Transcriptase Polymerase Chain Reaction; D017422:Sequence Analysis, DNA
chemical_list: D019590:Nucleocapsid Proteins; D012367:RNA, Viral; C099601:nucleocapsid protein, Rabies virus