title: Evolutionary history of the retinoblastoma gene from archaea to eukarya.
abstract: The retinoblastoma gene product (Rb protein) has a role in progression through the cell cycle, regulating the activities of several transcription factors such as E2F. Since its functional loss results in impaired differentiation in the nervous, hematopoietic, and muscular systems, the Rb protein is very important for cell regulation in multicellular eukaryotes. To gain an insight into the evolutionary history of the Rb gene, I have compared the amino acid sequences of Rb proteins in multicellular eukaryotes and unicellular organisms including yeast, archaeotes, and viruses. Two short amino acid sequences, in the N-terminal and pocket A regions of human Rb protein, found to be well conserved, also in a single protein of Saccharomyces cerevisiae. These sequences were also found in proteins of two archaeotes, Archaeoglobus fulgidus and Methanococcus jannaschii. Further, the most conserved sequence in the pocket B region among multicellular eukaryotic Rb proteins was also conserved in several poxviruses. From these data, I conclude that the pocket A and B regions, backbones of the Rb protein, are derived from different organisms, respectively, the ancestors of archaeote and poxvirus, and that the ancestral pocket B region has been lost during evolutionary history of unicellular eukaryotes.
authors.affiliation: Department of Human Functional Genomics, Life Science Research Center, Mie University, Tsu, Mie 514-8507, Japan. takemura@gene.mie-u.ac.jp
authors.forename: Masaharu
authors.initials: M
authors.lastname: Takemura
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D005075:Biological Evolution; D002453:Cell Cycle; D002454:Cell Differentiation; D019295:Computational Biology / Q000379:methods*; D019143:Evolution, Molecular; D005786:Gene Expression Regulation; D019766:Genes, Archaeal; D006801:Humans; D017017:Methanococcus / Q000235:genetics; D008954:Models, Biological; D008969:Molecular Sequence Data; D016160:Retinoblastoma Protein / Q000235:genetics* / Q000502:physiology*; D012441:Saccharomyces cerevisiae / Q000235:genetics; D017386:Sequence Homology, Amino Acid; D013045:Species Specificity; D049490:Systems Biology / Q000379:methods*
chemical_list: D016160:Retinoblastoma Protein