Housekeeping recA gene interrupted by group II intron in the thermophilic Geobacillus kaustophilus.
Most of group II introns are found in intergenes and CDSs with unknown functions, but not in housekeeping genes. In particular, no group II intron within the housekeeping recA gene has been reported either in eukaryotic genomes or in prokaryotic genomes. In this study, we found that the recA gene of the thermophilic Geobacillus kaustophilus genome is interrupted by a group II intron (Gk. Int1), and that Gk.Int1 can splice in temperatures above 70 degrees C in vivo. Here, we report the first prokaryotic group II intron to be found in a housekeeping gene, the characteristics of its self-splicing in vivo and in vitro, and our conclusion that the recA gene functions through the self-splicing of Gk.Int1. It is suggested that the amelioration of Gk.Int1 intron has occurred recently, and that it is still in the process of evolution to the recipient genome.
Chee
Gab-Joo
GJ
Microbial Genome Research Group, XBR, Japan Agency for Marine-Earth Science and Technology, 2-15 Natsushima Yokosuka 237-0061, Japan. cheegj@jamstec.go.jp
Takami
Hideto
H
D000595:Amino Acid Sequence; D001407:Bacillus / Q000235:genetics*; D001483:Base Sequence; D017931:DNA Primers; D005798:Genes, Bacterial; D007438:Introns; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation; D016366:Open Reading Frames; D012326:RNA Splicing; D012329:RNA, Bacterial / Q000737:chemistry; D011938:Rec A Recombinases / Q000235:genetics*; D017386:Sequence Homology, Amino Acid
D017931:DNA Primers; D012329:RNA, Bacterial; D011938:Rec A Recombinases