title: Molecular analysis of microbial population transition associated with the start of denitrification in a wastewater treatment process.
abstract: OBJECTIVE
  The objective of this study is to determine the bacteria playing an important role in denitrification by monitoring the molecular dynamics accompanying the start of denitrification.
  
  
  RESULTS
  cDNA reverse-transcribed from 16S rRNA was amplified with fluorescent labelled primer for terminal restriction fragment length polymorphism (T-RFLP) analysis and an unlabelled primer for cloning analysis. The terminal restriction fragments (T-RFs) that increased in association with the start of denitrification were determined. These T-RFs were identified by in silico analysis of 16S rRNA sequences obtained from cloning. As a result, it was clearly observed that the bacteria belonging to the genera Hydrogenophaga and Acidovorax increased in number after the start of denitrification.
  
  
  CONCLUSIONS
  It was demonstrated that T-RFLP analysis targeting 16S rRNA is appropriate for the daily monitoring of a bacterial community to control wastewater treatment processes. Combination of the results of T-RFLP analysis and 16S rRNA clone library indicated that the bacteria belonging to the genera Hydrogenophaga and Acidovorax play an important role in denitrification.
  
  
  CONCLUSIONS
  The results of this study provide new insight to the 16S rRNA level of active denitrifying bacteria in wastewater treatment processes.
authors.affiliation: Department of Chemical Engineering, Waseda University, Shinjuku-ku, Tokyo, Japan. t-hoshino@ruri.waseda.jp
authors.forename: T
authors.initials: T
authors.lastname: Hoshino
authors.forename: T
authors.initials: T
authors.lastname: Terahara
authors.forename: S
authors.initials: S
authors.lastname: Tsuneda
authors.forename: A
authors.initials: A
authors.lastname: Hirata
authors.forename: Y
authors.initials: Y
authors.lastname: Inamori
mesh_terms: D001439:Bacteroides / Q000145:classification / Q000235:genetics / Q000302:isolation & purification; D003001:Cloning, Molecular / Q000379:methods; D005798:Genes, Bacterial / Q000235:genetics; D009584:Nitrogen / Q000737:chemistry; D010802:Phylogeny; D016133:Polymerase Chain Reaction; D012150:Polymorphism, Restriction Fragment Length; D020560:Proteobacteria / Q000145:classification / Q000235:genetics / Q000302:isolation & purification; D012329:RNA, Bacterial / Q000032:analysis; D012336:RNA, Ribosomal, 16S / Q000032:analysis; D014871:Water Microbiology; D018508:Water Purification / Q000379:methods*
chemical_list: D012329:RNA, Bacterial; D012336:RNA, Ribosomal, 16S; D009584:Nitrogen