title: Type I antifreeze proteins expressed in snailfish skin are identical to their plasma counterparts.
abstract: Type I antifreeze proteins (AFPs) are usually small, Ala-rich alpha-helical polypeptides found in right-eyed flounders and certain species of sculpin. These proteins are divided into two distinct subclasses, liver type and skin type, which are encoded by separate gene families. Blood plasma from Atlantic (Liparis atlanticus) and dusky (Liparis gibbus) snailfish contain type I AFPs that are significantly larger than all previously described type I AFPs. In this study, full-length cDNA clones that encode snailfish type I AFPs expressed in skin tissues were generated using a combination of library screening and PCR-based methods. The skin clones, which lack both signal and pro-sequences, produce proteins that are identical to circulating plasma AFPs. Although all fish examined consistently express antifreeze mRNA in skin tissue, there is extreme individual variation in liver expression - an unusual phenomenon that has never been reported previously. Furthermore, genomic Southern blot analysis revealed that snailfish AFPs are products of multigene families that consist of up to 10 gene copies per genome. The 113-residue snailfish AFPs do not contain any obvious amino acid repeats or continuous hydrophobic face which typify the structure of most other type I AFPs. These structural differences might have implications for their ice-crystal binding properties. These results are the first to demonstrate a dual liver/skin role of identical type I AFP expression which may represent an evolutionary intermediate prior to divergence into distinct gene families.
authors.affiliation: Ocean Sciences Centre, Memorial University of Newfoundland, St. John's, Newfoundland, Canada. robert.evans@ualberta.ca
authors.forename: Robert P
authors.initials: RP
authors.lastname: Evans
authors.forename: Garth L
authors.initials: GL
authors.lastname: Fletcher
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D021322:Antifreeze Proteins, Type I / Q000097:blood / Q000737:chemistry / Q000235:genetics*; D001483:Base Sequence; D015152:Blotting, Northern; D015139:Blotting, Southern; D003001:Cloning, Molecular; D005399:Fishes / Q000097:blood / Q000235:genetics* / Q000378:metabolism; D018628:Gene Dosage; D015870:Gene Expression / Q000235:genetics*; D020869:Gene Expression Profiling; D015723:Gene Library; D008099:Liver / Q000737:chemistry / Q000378:metabolism; D008969:Molecular Sequence Data; D008970:Molecular Weight; D017433:Protein Structure, Secondary; D020133:Reverse Transcriptase Polymerase Chain Reaction; D017386:Sequence Homology, Amino Acid; D012867:Skin / Q000737:chemistry* / Q000378:metabolism
chemical_list: D021322:Antifreeze Proteins, Type I