title: [Methylophaga murata sp. nov.: a haloalkaliphilic aerobic methylotroph from deteriorating marble].
abstract: The haloalkaliphilic methylotrophic bacterium (strain Kr3) isolated from material scraped off the deteriorating marble of the Moscow Kremlin masonry has been found to be able to utilize methanol, methylamine, trimethylamine, and fructose as carbon and energy sources. Its cells are gram-negative motile rods multiplying by binary fission. Spores are not produced. The isolate is strictly aerobic and requires vitamin B12 and Na+ ions for growth. It is oxidase- and catalase-positive and reduces nitrates to nitrites. Growth occurs at temperatures between 0 and 42 degrees C (with the optimum temperatures being 20-32 degrees C), pH values between 6 and 11 (with the optimum at 8-9), and NaCl concentrations between 0.05 and 3 M (with the optimum at 0.5-1.5 M). The dominant cellular phospholipids are phosphatidylethanolamine, phosphatidylglycerol, and cardiolipin. The major cellular fatty acids are palmitic (C16:0), palmitoleic (C16:1), and octadecenoic (C18:1) acids. The major ubiquinone is Q8. The isolate accumulates ectoine and glutamate, as well as a certain amount of sucrose, to function as osmoprotectants and synthesizes an exopolysaccharide composed of carbohydrate and protein components. It is resistant to heating at 70 degrees C, freezing, and drying; utilizes methanol, with the resulting production of formic acid, which is responsible for the marble-degrading activity of the isolate; and implements the 2-keto-3-deoxy-6-phosphogluconate variant of the ribulose monophosphate pathway. The G+C content of its DNA is 44.6 mol%. Based on 16S rRNA gene sequencing and DNA-DNA homology levels (23-41%) with neutrophilic and alkaliphilic methylobacteria from the genus Methylophaga, the isolate has been identified as a new species, Methylophaga murata (VKM B-2303T = NCIMB 13993T).
authors.forename: N V
authors.initials: NV
authors.lastname: Doronina
authors.forename: Ts D
authors.initials: TsD
authors.lastname: Li
authors.forename: E G
authors.initials: EG
authors.lastname: Ivanova
authors.forename: Iu A
authors.initials: IuA
authors.lastname: Trotsenko
mesh_terms: D000599:Amino Acids, Diamino / Q000096:biosynthesis; D001482:Base Composition; D002119:Calcium Carbonate; D002374:Catalase / Q000378:metabolism; D003470:Culture Media; D004783:Environmental Microbiology; D005561:Formates / Q000378:metabolism; D006863:Hydrogen-Ion Concentration; D000432:Methanol / Q000378:metabolism; D020580:Methylobacterium / Q000737:chemistry / Q000145:classification* / Q000302:isolation & purification / Q000502:physiology; D008969:Molecular Sequence Data; D010088:Oxidoreductases / Q000378:metabolism; D010743:Phospholipids; D010802:Phylogeny; D012329:RNA, Bacterial / Q000235:genetics; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D013045:Species Specificity; D013696:Temperature
chemical_list: D000599:Amino Acids, Diamino; D003470:Culture Media; D005561:Formates; D010743:Phospholipids; D012329:RNA, Bacterial; D012336:RNA, Ribosomal, 16S; C030544:formic acid; C045628:ectoine; D010088:Oxidoreductases; D002374:Catalase; D002119:Calcium Carbonate; D000432:Methanol