title: Bovine viral diarrhoea virus (BVDV) subgenotypes in diagnostic laboratory accessions: distribution of BVDV1a, 1b, and 2a subgenotypes.
abstract: The prevalence of bovine viral diarrhoea virus (BVDV) biotypes and subgenotypes was determined from 131 BVDV positive samples from a diagnostic laboratory. The majority of the isolates were from Oklahoma; however, other states including Kansas, Texas, and Arkansas were represented. These BVDV samples were from submissions of 76 live animals and 55 necropsy samples. There were 131 BVDV samples represented by 117 noncytopathic (NCP), 11 cytopathic (CP) and 3 cases with mixed NCP and CP biotypes. The NCP isolates were more common (P < 0.05) than the CP and NCP/CP combination. The BVDV samples were segregated into three subgenotypes by differential PCR and sequencing of a viral genomic region, 5'-untranslated region (5'-UTR). There were more BVDV1b subgenotypes 60/131 (45.8%) than BVDV1a, 37/131 (28.2%) or BVDV2a, 34/131 (26.0%) (P < 0.05). The organ system involvement included the major categories such as respiratory, digestive, mixed/multiple organs, abortions, and persistent infections (PI). All three BVDV subgenotypes were found in persistently infected (PI) cattle and respiratory diseases, both major requests for BVDV diagnosis. Only one of the 131 viruses was genetically similar to the strains present in U.S. vaccines.
authors.affiliation: Department of Veterinary Pathobiology (Fulton, Ore, Confer, Saliki, Burge), Room 250 McElroy Hall, Center for Veterinary Health Sciences, Oklahoma State University, Stillwater, OK 74078, USA. rfulton@cvm.okstate.edu
authors.forename: Robert W
authors.initials: RW
authors.lastname: Fulton
authors.forename: Julia F
authors.initials: JF
authors.lastname: Ridpath
authors.forename: Sharon
authors.initials: S
authors.lastname: Ore
authors.forename: Anthony W
authors.initials: AW
authors.lastname: Confer
authors.forename: J T
authors.initials: JT
authors.lastname: Saliki
authors.forename: Lurinda J
authors.initials: LJ
authors.lastname: Burge
authors.forename: M E
authors.initials: ME
authors.lastname: Payton
mesh_terms: D000818:Animals; D015373:Bacterial Typing Techniques / Q000662:veterinary; D001912:Bovine Virus Diarrhea-Mucosal Disease / Q000175:diagnosis / Q000517:prevention & control / Q000821:virology*; D002417:Cattle; D004279:DNA, Viral / Q000032:analysis*; D003937:Diagnosis, Differential; D030241:Diarrhea Virus 1, Bovine Viral / Q000145:classification / Q000235:genetics; D030242:Diarrhea Virus 2, Bovine Viral / Q000145:classification / Q000235:genetics; D001908:Diarrhea Viruses, Bovine Viral / Q000145:classification* / Q000235:genetics*; D005838:Genotype; D010802:Phylogeny; D014611:Vaccination / Q000662:veterinary
chemical_list: D004279:DNA, Viral