title: Dorsoventral extension of the talairach transformation and its automatic calculation for magnetic resonance neuroimages.
abstract: The Talairach transformation (TT), the most prevalent method for brain normalization and atlas-to-data warping, is conceptually simple, fast and can be automated. Two problems with the TT in the clinical setting that are addressed in this article are reduced accuracy at the orbitofrontal cortex and upper corpus callosum (CC) and unsuitability for functional neurosurgery because of incomplete scanning. To increase dorsoventral accuracy, we introduce 2 additional landmarks: the top of the CC (SM) and the most ventral point of the orbitofrontal cortex on the midsagittal slab (IM). A method for their automatic calculation is proposed and validated against 55 diversified magnetic resonance (MR) imaging cases. The SM and IM landmarks are identified accurately and robustly in an automatic way. The average error of SM localization is 0.69 mm, and 91% of all cases have an error not greater than 1 mm. The average error of IM localization is 0.98 mm, approximately three quarters of cases have an error not greater than 1 mm, and 95% of all cases have an error not larger than 2 mm. The SM is correlated (R(2) = 0.72) with the most superior cortical landmark, whereas the IM is only loosely correlated (R(2) = 0.22) with the most inferior cortical landmark. On average, the original TT overlays the atlas axial plate at -24 on the orbitofrontal cortex as opposed to the correct plate at -28. Therefore, 1-dimensional ventral scaling in the original TT is insufficient to cope with variability in the orbitofrontal cortex. The key advantages of our approach are the preserved conceptual simplicity of the TT, fully automatic identification of the new landmarks, improved accuracy of the atlas-to-data match without compromising performance, and enabled TT use in functional neurosurgery when a dorsal part of the brain is not available in the scan.
authors.affiliation: Biomedical Imaging Laboratory, Agency for Science Technology and Research, Singapore. wieslaw@bii.a-star.edu.sg
authors.forename: Wieslaw L
authors.initials: WL
authors.lastname: Nowinski
authors.forename: K N Bhanu
authors.initials: KN
authors.lastname: Prakash
mesh_terms: D000465:Algorithms; D001921:Brain / Q000033:anatomy & histology*; D001931:Brain Mapping / Q000379:methods*; D003337:Corpus Callosum / Q000473:pathology; D001330:Electronic Data Processing / Q000379:methods; D006801:Humans; D007090:Image Interpretation, Computer-Assisted / Q000379:methods; D007091:Image Processing, Computer-Assisted / Q000379:methods; D008279:Magnetic Resonance Imaging / Q000379:methods* / Q000592:standards / Q000706:statistics & numerical data; D008962:Models, Theoretical; D019047:Phantoms, Imaging; D015203:Reproducibility of Results