Identification of Africanized honeybees.
Gas chromatography and pattern recognition methods were used to develop a potential method for differentiating European honeybees from Africanized honeybees. The test data consisted of 237 gas chromatograms of hydrocarbon extracts obtained from the wax glands, cuticle, and exocrine glands of European and Africanized honeybees. Each gas chromatogram contained 65 peaks corresponding to a set of standardized retention time windows. A genetic algorithm (GA) for pattern recognition was used to identify features in the gas chromatograms characteristic of the genotype. The pattern recognition GA searched for features in the chromatograms that optimized the separation of the European and Africanized honeybees in a plot of the two or three largest principal components of the data. Because the largest principal components capture the bulk of the variance in the data, the peaks identified by the pattern recognition GA primarily contained information about differences between gas chromatograms of European and Africanized honeybees. The principal component analysis routine embedded in the fitness function of the pattern recognition GA acted as an information filter, significantly reducing the size of the search space since it restricted the search to feature sets whose principal component plots showed clustering on the basis of the bees' genotype. In addition, the algorithm focused on those classes and/or samples that were difficult to classify as it trained using a form of boosting. Samples that consistently classify correctly are not as heavily weighted as samples that are difficult to classify. Over time, the algorithm learns its optimal parameters in a manner similar to a neural network. The pattern recognition GA integrates aspects of artificial intelligence and evolutionary computations to yield a "smart" one-pass procedure for feature selection and classification.
Lavine
Barry K
BK
Department of Chemistry, Oklahoma State University, Stillwater, OK 74078-3071, USA. bklab@chem.okstate.edu
Vora
Mehul N
MN
D000818:Animals; D001516:Bees / Q000737:chemistry* / Q000145:classification*; D002849:Chromatography, Gas / Q000379:methods*; D005088:Exocrine Glands / Q000737:chemistry; D008297:Male; D010363:Pattern Recognition, Automated / Q000379:methods*; D025341:Principal Component Analysis