The IgA nephropathy Biobank. An important starting point for the genetic dissection of a complex trait.
BACKGROUND
IgA nephropathy (IgAN) or Berger's disease, is the most common glomerulonephritis in the world diagnosed in renal biopsied patients. The involvement of genetic factors in the pathogenesis of the IgAN is evidenced by ethnic and geographic variations in prevalence, familial clustering in isolated populations, familial aggregation and by the identification of a genetic linkage to locus IGAN1 mapped on 6q22-23. This study seems to imply a single major locus, but the hypothesis of multiple interacting loci or genetic heterogeneity cannot be ruled out. The organization of a multi-centre Biobank for the collection of biological samples and clinical data from IgAN patients and relatives is an important starting point for the identification of the disease susceptibility genes.


METHODS
The IgAN Consortium organized a Biobank, recruiting IgAN patients and relatives following a common protocol. A website was constructed to allow scientific information to be shared between partners and to divulge obtained data (URL: http://www.igan.net). The electronic database, the core of the website includes data concerning the subjects enrolled. A search page gives open access to the database and allows groups of patients to be selected according to their clinical characteristics. DNA samples of IgAN patients and relatives belonging to 72 multiplex extended pedigrees were collected. Moreover, 159 trios (sons/daughters affected and healthy parents), 1068 patients with biopsy-proven IgAN and 1040 healthy subjects were included in the IgAN Consortium Biobank. Some valuable and statistically productive genetic studies have been launched within the 5th Framework Programme 1998-2002 of the European project No. QLG1-2000-00464 and preliminary data have been published in "Technology Marketplace" website: http://www.cordis.lu/marketplace.


CONCLUSIONS
The first world IgAN Biobank with a readily accessible database has been constituted. The knowledge gained from the study of Mendelian diseases has shown that the genetic dissection of a complex trait is more powerful when combined linkage-based, association-based, and sequence-based approaches are performed. This Biobank continuously expanded contains a sample size of adequately matched IgAN patients and healthy subjects, extended multiplex pedigrees, parent-child trios, thus permitting the combined genetic approaches with collaborative studies.
Schena
Francesco P
FP
Renal Unit, University of Bari, Italy. fp.schena@nephro.uniba.it
Cerullo
Giuseppina
G
Torres
Diletta D
DD
Scolari
Francesco
F
Foramitti
Marina
M
Amoroso
Antonio
A
Pirulli
Doroti
D
Floege
Jürgen
J
Mertens
Peter R
PR
Zerres
Klaus
K
Alexopoulos
Efstathios
E
Kirmizis
Dimitrios
D
Zelante
Leopoldo
L
Bisceglia
Luigi
L
Ghiggeri
Gian M
GM
Frascà
Giovanni M
GM
D030561:Databases, Nucleic Acid; D005060:Europe; D005260:Female; D020022:Genetic Predisposition to Disease / Q000235:genetics; D005922:Glomerulonephritis, IGA / Q000235:genetics*; D006801:Humans; D008297:Male