title: A mouse atlas of gene expression: large-scale digital gene-expression profiles from precisely defined developing C57BL/6J mouse tissues and cells.
abstract: We analyzed 8.55 million LongSAGE tags generated from 72 libraries. Each LongSAGE library was prepared from a different mouse tissue. Analysis of the data revealed extensive overlap with existing gene data sets and evidence for the existence of approximately 24,000 previously undescribed genomic loci. The visual cortex, pancreas, mammary gland, preimplantation embryo, and placenta contain the largest number of differentially expressed transcripts, 25% of which are previously undescribed loci.
authors.affiliation: Canada's Michael Smith Genome Sciences Centre, British Columbia Cancer Research Centre, British Columbia Cancer Agency, Vancouver, BC, Canada V5Z 4S6.
authors.forename: Asim S
authors.initials: AS
authors.lastname: Siddiqui
authors.forename: Jaswinder
authors.initials: J
authors.lastname: Khattra
authors.forename: Allen D
authors.initials: AD
authors.lastname: Delaney
authors.forename: Yongjun
authors.initials: Y
authors.lastname: Zhao
authors.forename: Caroline
authors.initials: C
authors.lastname: Astell
authors.forename: Jennifer
authors.initials: J
authors.lastname: Asano
authors.forename: Ryan
authors.initials: R
authors.lastname: Babakaiff
authors.forename: Sarah
authors.initials: S
authors.lastname: Barber
authors.forename: Jaclyn
authors.initials: J
authors.lastname: Beland
authors.forename: Slavita
authors.initials: S
authors.lastname: Bohacec
authors.forename: Mabel
authors.initials: M
authors.lastname: Brown-John
authors.forename: Steve
authors.initials: S
authors.lastname: Chand
authors.forename: David
authors.initials: D
authors.lastname: Charest
authors.forename: Anita M
authors.initials: AM
authors.lastname: Charters
authors.forename: Rebecca
authors.initials: R
authors.lastname: Cullum
authors.forename: Noreen
authors.initials: N
authors.lastname: Dhalla
authors.forename: Ruth
authors.initials: R
authors.lastname: Featherstone
authors.forename: Daniela S
authors.initials: DS
authors.lastname: Gerhard
authors.forename: Brad
authors.initials: B
authors.lastname: Hoffman
authors.forename: Robert A
authors.initials: RA
authors.lastname: Holt
authors.forename: Juan
authors.initials: J
authors.lastname: Hou
authors.forename: Byron Y-L
authors.initials: BY
authors.lastname: Kuo
authors.forename: Lisa L C
authors.initials: LL
authors.lastname: Lee
authors.forename: Stephanie
authors.initials: S
authors.lastname: Lee
authors.forename: Derek
authors.initials: D
authors.lastname: Leung
authors.forename: Kevin
authors.initials: K
authors.lastname: Ma
authors.forename: Corey
authors.initials: C
authors.lastname: Matsuo
authors.forename: Michael
authors.initials: M
authors.lastname: Mayo
authors.forename: Helen
authors.initials: H
authors.lastname: McDonald
authors.forename: Anna-liisa
authors.initials: AL
authors.lastname: Prabhu
authors.forename: Pawan
authors.initials: P
authors.lastname: Pandoh
authors.forename: Gregory J
authors.initials: GJ
authors.lastname: Riggins
authors.forename: Teresa Ruiz
authors.initials: TR
authors.lastname: de Algara
authors.forename: James L
authors.initials: JL
authors.lastname: Rupert
authors.forename: Duane
authors.initials: D
authors.lastname: Smailus
authors.forename: Jeff
authors.initials: J
authors.lastname: Stott
authors.forename: Miranda
authors.initials: M
authors.lastname: Tsai
authors.forename: Richard
authors.initials: R
authors.lastname: Varhol
authors.forename: Pavle
authors.initials: P
authors.lastname: Vrljicak
authors.forename: David
authors.initials: D
authors.lastname: Wong
authors.forename: Mona K
authors.initials: MK
authors.lastname: Wu
authors.forename: Yuan-Yun
authors.initials: YY
authors.lastname: Xie
authors.forename: George
authors.initials: G
authors.lastname: Yang
authors.forename: Ida
authors.initials: I
authors.lastname: Zhang
authors.forename: Martin
authors.initials: M
authors.lastname: Hirst
authors.forename: Steven J M
authors.initials: SJ
authors.lastname: Jones
authors.forename: Cheryl D
authors.initials: CD
authors.lastname: Helgason
authors.forename: Elizabeth M
authors.initials: EM
authors.lastname: Simpson
authors.forename: Pamela A
authors.initials: PA
authors.lastname: Hoodless
authors.forename: Marco A
authors.initials: MA
authors.lastname: Marra
mesh_terms: D017398:Alternative Splicing / Q000235:genetics; D000818:Animals; D020869:Gene Expression Profiling; D018507:Gene Expression Regulation, Developmental / Q000235:genetics*; D051379:Mice / Q000235:genetics*; D008810:Mice, Inbred C57BL / Q000235:genetics*; D005810:Multigene Family / Q000235:genetics; D022661:RNA, Untranslated / Q000235:genetics; D015203:Reproducibility of Results; D014158:Transcription, Genetic / Q000235:genetics
chemical_list: D022661:RNA, Untranslated