title: A circadian rhythm-regulated tomato gene is induced by Arachidonic acid and Phythophthora infestans infection.
abstract: A cDNA clone of unknown function, DEA1, was isolated from arachidonic acid-treated tomato (Solanum lycopersicum) leaves by differential display PCR. The gene, DEA1, is expressed in response to the programmed cell death-inducing arachidonic acid within 8 h following treatment of a tomato leaflet, 16 h prior to the development of visible cell death. DEA1 transcript levels were also affected by the late blight pathogen, Phytophthora infestans. To gain further insight into the transcriptional regulation of DEA1, the promoter region was cloned by inverse PCR and was found to contain putative stress-, signaling-, and circadian-response elements. DEA1 is highly expressed in roots, stems, and leaves, but not in flowers. Leaf expression of DEA1 is regulated by circadian rhythms during long days with the peak occurring at midday and the low point midway through the dark period. During short days, the rhythm is lost and DEA1 expression becomes constitutive. The predicted DEA1 protein has a conserved domain shared by the eight-cysteine motif superfamily of protease inhibitors, alpha-amylase inhibitors, seed storage proteins, and lipid transfer proteins. A DEA1-green fluorescent protein fusion protein localized to the plasma membrane in protoplasts and plasmolysis experiments, suggesting that the native protein is associated with the plasmalemma in intact cells.
authors.affiliation: Department of Plant Pathology, University of California, Davis, California 95616, USA.
authors.forename: Philip D
authors.initials: PD
authors.lastname: Weyman
authors.forename: Zhiqiang
authors.initials: Z
authors.lastname: Pan
authors.forename: Qin
authors.initials: Q
authors.lastname: Feng
authors.forename: David G
authors.initials: DG
authors.lastname: Gilchrist
authors.forename: Richard M
authors.initials: RM
authors.lastname: Bostock
mesh_terms: D000595:Amino Acid Sequence; D016718:Arachidonic Acid / Q000494:pharmacology*; D002462:Cell Membrane / Q000378:metabolism; D002940:Circadian Rhythm / Q000235:genetics*; D018076:DNA, Complementary / Q000235:genetics / Q000378:metabolism; D018506:Gene Expression Regulation, Plant; D017343:Genes, Plant; D007113:Immunity, Innate; D018551:Solanum lycopersicum / Q000187:drug effects / Q000235:genetics* / Q000378:metabolism; D008969:Molecular Sequence Data; D009868:Oomycetes / Q000472:pathogenicity; D010935:Plant Diseases / Q000235:genetics; D010940:Plant Proteins / Q000096:biosynthesis / Q000235:genetics*; D011401:Promoter Regions, Genetic; D017434:Protein Structure, Tertiary; D011993:Recombinant Fusion Proteins / Q000378:metabolism; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA; D015398:Signal Transduction
chemical_list: D018076:DNA, Complementary; D010940:Plant Proteins; D011993:Recombinant Fusion Proteins; D016718:Arachidonic Acid