EDGE: extraction and analysis of differential gene expression.
EDGE (Extraction of Differential Gene Expression) is an open source, point-and-click software program for the significance analysis of DNA microarray experiments. EDGE can perform both standard and time course differential expression analysis. The functions are based on newly developed statistical theory and methods. This document introduces the EDGE software package.
Leek
Jeffrey T
JT
Department of Biostatistics, University of Washington, Seattle 98195, USA. jtleek@u.washington.edu
Monsen
Eva
E
Dabney
Alan R
AR
Storey
John D
JD
D000465:Algorithms; D016000:Cluster Analysis; D003196:Computer Graphics; D020869:Gene Expression Profiling / Q000379:methods*; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods*; D010363:Pattern Recognition, Automated / Q000379:methods*; D012984:Software; D014584:User-Computer Interface