Complete nucleotide sequence of Radish mosaic virus RNA polymerase gene and phylogenetic relationships in the genus Comovirus.
The 3'-terminal part of RNA1 genome segment of Radish mosaic virus (RaMV) including complete RNA polymerase gene was sequenced. The 207 amino acids long polymerase is matured from a polyprotein precursor by cleavage at putative Q/H site by viral protease. The alignment of available amino acid sequences of RNA polymerase genes of comoviruses revealed a closest (55%) identity of RaMV to Red clover mottle virus (RCMV).
Petrzik
K
K
Department of Plant Virology, Institute of Plant Molecular Biology, Academy of Sciences of the Czech Republic, Branisovská 31, 370 05 Ceské Budejovice, Czech Republic. petrzik@umbr.cas.cz
Holá
M
M
Spak
J
J
D000595:Amino Acid Sequence; D017798:Comovirus / Q000235:genetics*; D017124:Conserved Sequence; D012321:DNA-Directed RNA Polymerases / Q000235:genetics*; D008969:Molecular Sequence Data; D009029:Mosaic Viruses / Q000235:genetics*; D010802:Phylogeny; D010946:Plants, Medicinal; D012367:RNA, Viral / Q000235:genetics*; D031224:Raphanus / Q000235:genetics* / Q000821:virology*; D017423:Sequence Analysis, RNA; D017386:Sequence Homology, Amino Acid
D012367:RNA, Viral; D012321:DNA-Directed RNA Polymerases