title: Influence of the nature of the T-DNA insertion region on transgene expression in Arabidopsis thaliana.
abstract: In the experiment reported here, effect of the nature of T-DNA integration region on the activity of the transgenes was studied by using a colour marker gene in Arabidopsis thaliana. For this purpose a pale homozygous ch-42 mutant was transformed with the wild-type copy of the gene (CH-42) using kanamycin resistance gene as a selectable marker. Two independent lines were identified in which CH-42 transgene was inactive. The T-DNA flanking sequences were recovered from these inactive and two active lines. These flanking sequences were used to examine copy number and DNA methylation of the T-DNA insertion site in active and inactive lines. Southern blots produced by using MspI/HpaII digested genomic DNA showed signs of methylation in both inactive lines. Furthermore, in one of the inactive line the T-DNA flanking sequence probe hybridized to highly repetitive sequence. The results suggest some correlation between silencing of the transgene and methylation of its insertion region.
authors.affiliation: Department of Biological Sciences, Quaid-I-Azam University, Islamabad, Pakistan. bushra_dr@yahoo.com
authors.forename: B
authors.initials: B
authors.lastname: Mirza
mesh_terms: D017360:Arabidopsis / Q000235:genetics*; D019175:DNA Methylation; D018628:Gene Dosage / Q000235:genetics; D018506:Gene Expression Regulation, Plant / Q000235:genetics*; D005819:Genetic Markers; D018745:Genome, Plant / Q000235:genetics*; D016254:Mutagenesis, Insertional; D010858:Pigmentation / Q000235:genetics*; D030821:Plants, Genetically Modified / Q000235:genetics; D019076:Transgenes / Q000235:genetics
chemical_list: D005819:Genetic Markers