title: A plausible model of phyllotaxis.
abstract: A striking phenomenon unique to the kingdom of plants is the regular arrangement of lateral organs around a central axis, known as phyllotaxis. Recent molecular-genetic experiments indicate that active transport of the plant hormone auxin is the key process regulating phyllotaxis. A conceptual model based on these experiments, introduced by Reinhardt et al. [Reinhardt, D., Pesce, E. R., Stieger, P., Mandel, T., Baltensperger, K., et al. (2003) Nature 426, 255-260], provides an intuitively plausible interpretation of the data, but raises questions of whether the proposed mechanism is, in fact, capable of producing the observed temporal and spatial patterns, is robust, can start de novo, and can account for phyllotactic transitions, such as the frequently observed transition from decussate to spiral phyllotaxis. To answer these questions, we created a computer simulation model based on data described previously or in this paper and reasonable hypotheses. The model reproduces, within the standard error, the divergence angles measured in Arabidopsis seedlings and the effects of selected experimental manipulations. It also reproduces distichous, decussate, and tricussate patterns. The model thus offers a plausible link between molecular mechanisms of morphogenesis and the geometry of phyllotaxis.
authors.affiliation: Department of Computer Science, University of Calgary, 2500 University Drive NW, Calgary, Alberta, Canada T2N 1N4.
authors.forename: Richard S
authors.initials: RS
authors.lastname: Smith
authors.forename: Soazig
authors.initials: S
authors.lastname: Guyomarc'h
authors.forename: Therese
authors.initials: T
authors.lastname: Mandel
authors.forename: Didier
authors.initials: D
authors.lastname: Reinhardt
authors.forename: Cris
authors.initials: C
authors.lastname: Kuhlemeier
authors.forename: Przemyslaw
authors.initials: P
authors.lastname: Prusinkiewicz
mesh_terms: D000483:Alleles; D017360:Arabidopsis / Q000235:genetics* / Q000378:metabolism; D001692:Biological Transport; D001693:Biological Transport, Active; D003198:Computer Simulation; D018506:Gene Expression Regulation, Plant; D005821:Genetic Techniques; D049452:Green Fluorescent Proteins / Q000378:metabolism; D007210:Indoleacetic Acids / Q000737:chemistry / Q000378:metabolism; D018519:Meristem / Q000378:metabolism; D018613:Microscopy, Confocal; D008856:Microscopy, Fluorescence; D008954:Models, Biological; D008957:Models, Genetic; D015233:Models, Statistical; D009024:Morphogenesis; D009154:Mutation; D000072340:NIMA-Interacting Peptidylprolyl Isomerase; D019696:Peptidylprolyl Isomerase / Q000096:biosynthesis; D018521:Plant Physiological Phenomena; D010940:Plant Proteins / Q000378:metabolism*; D010944:Plants / Q000033:anatomy & histology; D012639:Seeds / Q000378:metabolism; D013997:Time Factors; D015854:Up-Regulation
chemical_list: D007210:Indoleacetic Acids; D000072340:NIMA-Interacting Peptidylprolyl Isomerase; D010940:Plant Proteins; D049452:Green Fluorescent Proteins; D019696:Peptidylprolyl Isomerase