title: Initial repertoire of anti-(4-hydroxy-3-nitrophenylacetyl) antibodies as potential donors for effective affinity maturation.
abstract: We previously found that there are two distinct antibody (Ab) maturation pathways for the immune response of C57BL/6 mice to 4-hydroxy-3-nitrophenylacetyl (NP), one involving Abs with high evolvability (group-H) and the other involving Abs with low evolvability (group-L). Commitment to whichever pathway is followed pre-determined in B cells at an early developmental stage. Candidates for the group-L or -H pathway are thus expected to pre-exist in the initial repertoire of the immune response. In the present study, we examined the initial Ab repertoire from the viewpoint of the latent potential of these Abs for effective affinity maturation. At first, we prepared anti-NP B cell hybridomas at 1 week postimmunization. Although the diversity of the obtained repertoire was maintained mainly by the third complementarity determining region of the heavy chain (CDR-H3), their changes in the near UV circular dichroism resulting from NP-binding allowed for classification into three groups according to the same rules applied in the pathway classification of the maturated Abs. This suggested that the innate structural properties of CDR-H3 were conserved throughout maturation. In other words, in exploring the structure of CDR-H3, it is possible to distinguish the latent potentials of Abs in effective affinity maturation even those making up the initial Ab repertoire. We then examined an artificially designed group-H Ab prototype and found its NP-binding ability sufficient for engagement in the initial repertoire. The question arose here as to why the majority of the actual initial repertoire consisted of the group-L ancestors regardless of their middling NP-binding affinity, which called for further discussion from the viewpoint of the dynamics possibly shaping the repertoire.
authors.affiliation: Research Institute for Biological Sciences (RIBS), Tokyo University of Science, 2669, Yamazaki, Noda, Chiba 278-0022, Japan. koji-furukawa@aist.go.jp
authors.forename: Koji
authors.initials: K
authors.lastname: Furukawa
authors.forename: Akio
authors.initials: A
authors.lastname: Manabe
authors.forename: Atsuko
authors.initials: A
authors.lastname: Furukawa
authors.forename: Hiroyoshi
authors.initials: H
authors.lastname: Kuba
authors.forename: Toshihide
authors.initials: T
authors.lastname: Okajima
authors.forename: Takachika
authors.initials: T
authors.lastname: Azuma
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D000906:Antibodies / Q000737:chemistry / Q000235:genetics / Q000276:immunology*; D000915:Antibody Affinity / Q000276:immunology*; D000917:Antibody Formation; D000918:Antibody Specificity / Q000276:immunology; D000936:Antigen-Antibody Complex / Q000276:immunology; D001402:B-Lymphocytes / Q000276:immunology; D002942:Circular Dichroism; D022801:Complementarity Determining Regions / Q000737:chemistry; D006241:Haptens / Q000276:immunology*; D007140:Immunoglobulin Fab Fragments / Q000737:chemistry; D007135:Immunoglobulin Variable Region / Q000737:chemistry; D051379:Mice; D008810:Mice, Inbred C57BL; D008958:Models, Molecular; D008969:Molecular Sequence Data; D009596:Nitrophenols / Q000276:immunology*; D019151:Peptide Library; D010648:Phenylacetates
chemical_list: D000906:Antibodies; D000936:Antigen-Antibody Complex; D022801:Complementarity Determining Regions; D006241:Haptens; D007140:Immunoglobulin Fab Fragments; D007135:Immunoglobulin Variable Region; D009596:Nitrophenols; D019151:Peptide Library; D010648:Phenylacetates; C026242:4-hydroxy-5-nitrophenyl acetic acid