A comprehensive software suite for the analysis of cDNAs.
We have developed a comprehensive software suite for bioinformatics research of cDNAs; it is aimed at rapid characterization of the features of genes and the proteins they code. Methods implemented include the detection of translation initiation and termination signals, statistical analysis of codon usage, comparative study of amino acid composition, comparative modeling of the structures of product proteins, prediction of alternative splice forms, and metabolic pathway reconstruction.
Arakawa
Kazuharu
K
Institute for Advanced Biosciences, Keio University, Fujisawa 252-8520, Japan. mt@sfc.keio.ac.jp
Suzuki
Haruo
H
Fujishima
Kosuke
K
Fujimoto
Kenji
K
Ueda
Sho
S
Matsui
Motomu
M
Tomita
Masaru
M
D017398:Alternative Splicing; D000596:Amino Acids / Q000032:analysis; D000818:Animals; D016000:Cluster Analysis; D018387:Codon, Initiator; D018388:Codon, Terminator; D019295:Computational Biology; D018076:DNA, Complementary / Q000032:analysis*; D020407:Internet; D008969:Molecular Sequence Data; D011487:Protein Conformation; D012984:Software
D000596:Amino Acids; D018387:Codon, Initiator; D018388:Codon, Terminator; D018076:DNA, Complementary