A comprehensive software suite for the analysis of cDNAs.
We have developed a comprehensive software suite for bioinformatics research of cDNAs; it is aimed at rapid characterization of the features of genes and the proteins they code. Methods implemented include the detection of translation initiation and termination signals, statistical analysis of codon usage, comparative study of amino acid composition, comparative modeling of the structures of product proteins, prediction of alternative splice forms, and metabolic pathway reconstruction.
Institute for Advanced Biosciences, Keio University, Fujisawa 252-8520, Japan. mt@sfc.keio.ac.jp
Kazuharu
K
Arakawa
Haruo
H
Suzuki
Kosuke
K
Fujishima
Kenji
K
Fujimoto
Sho
S
Ueda
Motomu
M
Matsui
Masaru
M
Tomita
D017398:Alternative Splicing; D000596:Amino Acids / Q000032:analysis; D000818:Animals; D016000:Cluster Analysis; D018387:Codon, Initiator; D018388:Codon, Terminator; D019295:Computational Biology; D018076:DNA, Complementary / Q000032:analysis*; D020407:Internet; D008969:Molecular Sequence Data; D011487:Protein Conformation; D012984:Software
D000596:Amino Acids; D018387:Codon, Initiator; D018388:Codon, Terminator; D018076:DNA, Complementary