title: Comparison between two amplification sets for molecular diagnosis of toxoplasmosis by real-time PCR.
abstract: PCR is now commonly applied to the diagnosis of toxoplasmosis. Although several methods are available, comparative studies are few, making it difficult to compare the performance of each technique. We compared the sensitivities of two real-time PCR assays through a prospective study on fetuses, neonates, and immunocompromised patients and on the ocular diagnosis of toxoplasmosis. The first system targeted the widely used B1 gene (GenBank accession number AF179871) while the second (RE) targeted a more recently described sequence repeated roughly 200 to 300 times (GenBank accession number AF146527). We demonstrated that molecular diagnosis requires the duplication of PCR assays, especially with the B1 system, as only one PCR was positive in 33.3% of cases. Our study showed that the RE target was more sensitive for all biological samples (amniotic fluid, placenta, aqueous humor, whole blood, and cerebrospinal and bronchoalveolar fluids) and significantly improved the performance of the diagnosis of toxoplasmosis. Taking into consideration all clinical samples, the mean gain in the crossing point value was 4.2 +/- 1.7 cycles and was even more significant for amniotic fluid (5.8 +/- 1.7 cycles).
authors.affiliation: Service de Parasitologie-Mycologie, Centre Hospitalier Universitaire Rangueil, TSA 50032, 31059 Toulouse cedex 9, France. cassaing.s@chu-toulouse.fr
authors.forename: S
authors.initials: S
authors.lastname: Cassaing
authors.forename: M H
authors.initials: MH
authors.lastname: Bessières
authors.forename: A
authors.initials: A
authors.lastname: Berry
authors.forename: A
authors.initials: A
authors.lastname: Berrebi
authors.forename: R
authors.initials: R
authors.lastname: Fabre
authors.forename: J F
authors.initials: JF
authors.lastname: Magnaval
mesh_terms: D000653:Amniotic Fluid / Q000469:parasitology; D000818:Animals; D001082:Aqueous Humor / Q000469:parasitology; D001483:Base Sequence; D001992:Bronchoalveolar Lavage Fluid / Q000469:parasitology; D016054:DNA, Protozoan / Q000097:blood / Q000134:cerebrospinal fluid / Q000235:genetics / Q000302:isolation & purification; D005260:Female; D017125:Genes, Protozoan; D006801:Humans; D016867:Immunocompromised Host; D007231:Infant, Newborn; D010920:Placenta / Q000469:parasitology; D016133:Polymerase Chain Reaction / Q000379:methods* / Q000706:statistics & numerical data; D011247:Pregnancy; D015597:Pregnancy Complications, Parasitic / Q000175:diagnosis / Q000469:parasitology; D011296:Prenatal Diagnosis; D012680:Sensitivity and Specificity; D014122:Toxoplasma / Q000235:genetics / Q000302:isolation & purification; D014123:Toxoplasmosis / Q000150:complications / Q000175:diagnosis* / Q000469:parasitology; D014125:Toxoplasmosis, Congenital / Q000175:diagnosis / Q000469:parasitology; D014126:Toxoplasmosis, Ocular / Q000175:diagnosis / Q000469:parasitology
chemical_list: D016054:DNA, Protozoan