DRTF: a database of rice transcription factors.
CONCLUSIONS
DRTF contains 2025 putative transcription factors (TFs) in Oryza sativa L. ssp. indica and 2384 in ssp. japonica, distributed in 63 families, identified by computational prediction and manual curation. It includes detailed annotations of each TF including sequence features, functional domains, Gene Ontology assignment, chromosomal localization, EST and microarray expression information, as well as multiple sequence alignment of the DNA-binding domains for each TF family. The database can be browsed and searched with a user-friendly web interface.


BACKGROUND
DRTF is available at http://drtf.cbi.pku.edu.cn
Gao
Ge
G
Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, College of Life Sciences, Peking University Beijing 100871, People's Republic of China.
Zhong
Yingfu
Y
Guo
Anyuan
A
Zhu
Qihui
Q
Tang
Wen
W
Zheng
Weimou
W
Gu
Xiaocheng
X
Wei
Liping
L
Luo
Jingchu
J
D003628:Database Management Systems; D030562:Databases, Protein; D016247:Information Storage and Retrieval / Q000379:methods*; D020407:Internet; D012275:Oryza / Q000235:genetics* / Q000378:metabolism*; D014157:Transcription Factors / Q000145:classification / Q000235:genetics*; D014584:User-Computer Interface
D014157:Transcription Factors