SmartPhantom--an fMRI simulator.
Many informatics tools have emerged to process the voluminous and complex data generated by functional magnetic resonance imaging (fMRI). The interpretation of fMRI exams is largely determined by these tools. However, their performance is hard to evaluate because there is no independent means of calibration. A novel fMRI calibration system called SmartPhantom has been developed to simulate functional blood oxygen level dependent (BOLD) imaging. SmartPhantom contains a quadrature radio frequency coil, comprising two perpendicular planar loops that can be externally activated or deactivated. The system is able to produce reasonably uniform signal enhancements in a calibration sample surrounded by the two loops during an MRI scan. The enhancement is controlled well in both magnitude and predefined timing and produces BOLD-like signals. Characteristics of SmartPhantom are discussed in detail, followed by a comparison of fMRI informatics tools. Two fMRI data sets are acquired with the SmartPhantom. One with high signal-to-noise ratio provides the calibration. Another with lower SNR is input into three software packages (BrainVoyager, FSL and Statistical Parametric Mapping 2) for data preprocessing and statistical analysis. Results from the three packages are compared in both sensitivity of detecting the activation and correlation between the predicted activation and calibration.
Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN 47405, USA. hucheng@indiana.edu
Hu
H
Cheng
Qun
Q
Zhao
George R
GR
Duensing
Williams A
WA
Edelstein
Diana
D
Spencer
Nick
N
Browne
Charles
C
Saylor
Mark
M
Limkeman
D002138:Calibration; D004867:Equipment Design; D005782:Gels; D007089:Image Enhancement / Q000295:instrumentation*; D007091:Image Processing, Computer-Assisted; D008279:Magnetic Resonance Imaging / Q000295:instrumentation*; D010100:Oxygen / Q000097:blood; D019047:Phantoms, Imaging; D012680:Sensitivity and Specificity; D012984:Software
D005782:Gels; D010100:Oxygen