Ac-like transposons in populations of wild diploid Triticeae species: comparative analysis of chromosomal distribution.
Data are presented on the intra- and interspecific differences/similarities in chromosomal patterns of Ac-like elements (hAT family) in ecologically contrasted populations of three Triticeae species - Aegilops speltoides, Triticum urartu, and Hordeum spontaneum. Application of original computer software made it possible to precisely map transposon clusters and to link them to known chromosomal markers (rDNA sites, centromeres, and heterochromatin regions). From our data we can specify the most visible features of Ac-like elements chromosomal distribution: preferential concentration in chromosomal proximal regions; high percentage of clusters on the border between euchromatin and heterochromatin; complementary chromosomal arrangement towards En/Spm transposons (CACTA); population-specific insertions into centromeres; more differences in total cluster numbers between populations of self-pollinated species than between populations of cross-pollinated species. The application of statistical simulation (Resampling) method to analysis of data indicates that ecology may play a certain role in dynamics of Ac-like elements. Comparison of real Ayala distances, as well as real chromosomal distribution of Ac-like elements in populations of two species with different mating systems with the same but randomly simulated parameters, revealed that non-random population structure in the Mediterranean floral zone suffers and becomes chaotic in the Irano-Turanian zone.
Altinkut
Ahu
A
Institute of Evolution, University of Haifa, Mt Carmel, Haifa, 31905, Israel.
Kotseruba
Violetta
V
Kirzhner
Valery M
VM
Nevo
Eviatar
E
Raskina
Olga
O
Belyayev
Alexander
A
D001483:Base Sequence; D002874:Chromosome Mapping; D032461:Chromosomes, Plant; D018744:DNA, Plant; D004171:Diploidy; D002523:Edible Grain / Q000145:classification / Q000235:genetics*; D005828:Genetics, Population; D018745:Genome, Plant; D017403:In Situ Hybridization; D018749:RNA, Plant / Q000235:genetics; D012335:RNA, Ribosomal / Q000235:genetics; D012341:RNA, Ribosomal, 5S / Q000235:genetics; D018626:Retroelements; D013045:Species Specificity
D018744:DNA, Plant; D018749:RNA, Plant; D012335:RNA, Ribosomal; D012341:RNA, Ribosomal, 5S; C088179:RNA, ribosomal, 45S; D018626:Retroelements