title: Insight into the binding of antifreeze proteins to ice surfaces via 13C spin lattice relaxation solid-state NMR.
abstract: The primary sequences of type I antifreeze proteins (AFPs) are Ala rich and contain three 11-residue repeat units beginning with threonine residues. Their secondary structures consist of alpha-helices. Previous activity study of side-chain mutated AFPs suggests that the ice-binding side of type I AFPs comprises the Thr side chains and the conserved i + 4 and i + 8 Ala residues, where i indicates the positions of the Thrs. To find structural evidence for the AFP's ice-binding side, a variable-temperature dependent (13)C spin lattice relaxation solid-state NMR experiment was carried out for two Ala side chain (13)C labeled HPLC6 isoforms of the type I AFPs each frozen in H(2)O and D(2)O, respectively. The first one was labeled on the equivalent 17th and 21st Ala side chains (i + 4, 8), and the second one on the equivalent 8th, 19th, and 30th Ala side chains (i + 6). The two kinds of labels are on the opposite sides of the alpha-helical AFP. A model of Ala methyl group rotation/three-site rotational jump combined with water molecular reorientation was tested to probe the interactions of the methyl groups with the proximate water molecules. Analysis of the T(1) data shows that there could be 10 water molecules closely capping an i + 4 or an i + 8 methyl group within the range of van der Waals interaction, whereas the surrounding water molecules to the i + 6 methyl groups could be looser. This study suggests that the side of the alpha-helical AFP comprising the i + 4 and i + 8 Ala methyl groups could interact with the ice surface in the ice/water interface.
authors.affiliation: Department of Chemistry and Biochemistry, California State University, Los Angeles, 90032, USA.
authors.forename: Yougang
authors.initials: Y
authors.lastname: Mao
authors.forename: Yong
authors.initials: Y
authors.lastname: Ba
mesh_terms: D021301:Antifreeze Proteins / Q000737:chemistry*; D001703:Biophysics / Q000379:methods; D002250:Carbon Radioisotopes / Q000737:chemistry*; D002851:Chromatography, High Pressure Liquid; D007053:Ice; D009682:Magnetic Resonance Spectroscopy / Q000379:methods*; D008958:Models, Molecular; D015233:Models, Statistical; D008962:Models, Theoretical; D020033:Protein Isoforms; D017433:Protein Structure, Secondary; D014867:Water / Q000737:chemistry
chemical_list: D021301:Antifreeze Proteins; D002250:Carbon Radioisotopes; D007053:Ice; D020033:Protein Isoforms; D014867:Water