title: Expression profiles of bovine adeno-associated virus and avian adeno-associated virus display significant similarity to that of adeno-associated virus type 5.
abstract: We present the first detailed expression profiles of nonprimate-derived adeno-associated viruses, namely, bovine adeno-associated virus (B-AAV) and avian adeno-associated virus (A-AAV), which were obtained after the infection of cell lines derived from their natural hosts. In general, the profiles of B-AAV and A-AAV were quite similar to that of AAV5; however, both exhibited features found for AAV2 as well. Like adeno-associated virus type 5 (AAV5), B-AAV and A-AAV utilized an internal polyadenylation site [(pA)p]; however, it was used to greater relative levels by B-AAV than by A-AAV. Similar to AAV5, >99% of B-AAV RNAs generated from upstream promoters were polyadenylated at (pA)p and hence not spliced. In contrast, ca. 50% of the A-AAV RNAs generated from upstream promoters read through (pA)p, as seen for AAV2. However, A-AAV generated lower levels of spliced P5 and P19 products than does AAV2, suggesting that A-AAV generates lower relative levels of Rep 68 and Rep 40. An additional difference in the expression profile of these viruses was that B-AAV generated a greater level of ITR-initiated RNAs than did A-AAV or AAV5. In addition, we demonstrate that, like AAV2, transactivation of transcription of the capsid-gene promoter of B-AAV required both adenovirus and targeting of its Rep protein to the transcription template; however, expression of the capsid-gene promoter of A-AAV was, like AAV5, largely independent of both adenovirus and its Rep proteins.
authors.affiliation: Life Sciences Center, University of Missouri-Columbia, 1201 Rollins Road, Columbia, MO 65211, USA.
authors.forename: Jianming
authors.initials: J
authors.lastname: Qiu
authors.forename: Fang
authors.initials: F
authors.lastname: Cheng
authors.forename: David J
authors.initials: DJ
authors.lastname: Pintel
mesh_terms: D000818:Animals; D001717:Birds; D002417:Cattle; D002460:Cell Line; D000229:Dependovirus / Q000145:classification / Q000235:genetics / Q000378:metabolism*; D015870:Gene Expression; D020869:Gene Expression Profiling; D011401:Promoter Regions, Genetic; D012367:RNA, Viral / Q000378:metabolism*; D013045:Species Specificity; D014764:Viral Proteins / Q000502:physiology*
chemical_list: D012367:RNA, Viral; D014764:Viral Proteins