title: Borrelia burgdorferi EbfC, a novel, chromosomally encoded protein, binds specific DNA sequences adjacent to erp loci on the spirochete's resident cp32 prophages.
abstract: All examined isolates of the Lyme disease spirochete, Borrelia burgdorferi, naturally maintain numerous variants of a prophage family as circular cp32 episomes. Each cp32 carries a locus encoding one or two different Erp outer membrane, surface-exposed lipoproteins. Many of the Erp proteins bind a host complement regulator, factor H, which is hypothesized to protect the spirochete from complement-mediated killing. We now describe the isolation and characterization of a novel, chromosomally encoded protein, EbfC, that binds specific DNA sequences located immediately 5' of all erp loci. This is one of the first site-specific DNA-binding proteins to be identified in any spirochete. The location of the ebfC gene on the B. burgdorferi chromosome suggests that the cp32 prophages have evolved to use this bacterial host protein for their own benefit and that EbfC probably plays additional roles in the bacterium. A wide range of other bacteria encode homologs of EbfC, none of which have been well characterized, so demonstration that B. burgdorferi EbfC is a site-specific DNA-binding protein has broad implications across the eubacterial kingdom.
authors.affiliation: Department of Microbiology, Immunology, and Molecular Genetics, University of Kentucky College of Medicine, MS421 W. R. Willard Medical Education Building, Lexington, KY 40536-0298, USA.
authors.forename: Kelly
authors.initials: K
authors.lastname: Babb
authors.forename: Tomasz
authors.initials: T
authors.lastname: Bykowski
authors.forename: Sean P
authors.initials: SP
authors.lastname: Riley
authors.forename: M Clarke
authors.initials: MC
authors.lastname: Miller
authors.forename: Edward
authors.initials: E
authors.lastname: Demoll
authors.forename: Brian
authors.initials: B
authors.lastname: Stevenson
mesh_terms: D000595:Amino Acid Sequence; D001425:Bacterial Outer Membrane Proteins / Q000235:genetics; D001426:Bacterial Proteins / Q000235:genetics / Q000378:metabolism* / Q000502:physiology; D001435:Bacteriophages / Q000502:physiology*; D001483:Base Sequence; D001665:Binding Sites / Q000235:genetics; D025065:Borrelia burgdorferi / Q000737:chemistry / Q000235:genetics* / Q000821:virology*; D002876:Chromosomes, Bacterial / Q000235:genetics*; D004269:DNA, Bacterial / Q000235:genetics / Q000378:metabolism*; D004268:DNA-Binding Proteins / Q000235:genetics / Q000378:metabolism*; D008074:Lipoproteins / Q000235:genetics; D008193:Lyme Disease / Q000382:microbiology; D008242:Lysogeny; D008969:Molecular Sequence Data; D010957:Plasmids; D039002:Prophages / Q000378:metabolism; D016415:Sequence Alignment
chemical_list: D001425:Bacterial Outer Membrane Proteins; D001426:Bacterial Proteins; D004269:DNA, Bacterial; D004268:DNA-Binding Proteins; D008074:Lipoproteins