[Newcastle disease virus heredity mutation and correlation of HN and F gene].
Prevailed Newcastle disease virus isolates were collected during 1999-2005 in China. These isolates were purified by CEF plaque assay and replicated in SPF embryos. The fusion protein (F) gene and hemagglutinin-neuraminidase (HN) gene of these isolated viruses were cloned and sequenced. Some of the F gene and HN gene sequences from GenBank were also used in this study. The homologies of nucleotide and amino acids were compared and correlations were analyzed by SPSS8.0 software among different length sequences of the F gene or HN gene. The nucleotide homologies and correlation among the F gene and HN gene were also analyzed. The results indicated there are good correlation among different length sequences of the F gene or HN gene and the F genome or HN genome (r > or = 0.973). There was also good correlations among different length amino acids of NDV F protein or HN protein (0.911< or = r < or = 0.968). But, there was only a less correlation between the whole F gene and HN gene (r = 0.312). The heredity mutation of HN genes had the character of geographical areas. The sequences of HN gene in Chinese isolates had an identity of more than 97%. But there was only 79.2% - 80.7% in HN nucleotide homology among the Chinese isolates and La Sota (vaccine).
Qin
Zhuo-Ming
ZM
College of Animal Science and Technology, Shandong Agriculture University, Tai'an 271018, China. qinzm1997@163.com
Ma
Bao-Chen
BC
He
Ye-Feng
YF
Wang
You-Ling
YL
Cui
Zhi-Zhong
ZZ
D000818:Animals; D046090:Anseriformes; D001715:Bird Diseases / Q000821:virology*; D010856:Columbidae; D015707:HN Protein / Q000235:genetics*; D008969:Molecular Sequence Data; D009154:Mutation; D009521:Newcastle Disease / Q000821:virology*; D009522:Newcastle disease virus / Q000235:genetics* / Q000302:isolation & purification; D012689:Sequence Homology, Nucleic Acid; D014760:Viral Fusion Proteins / Q000235:genetics*
D015707:HN Protein; D014760:Viral Fusion Proteins