title: Nucleic acid amplification technology screening for hepatitis C virus and human immunodeficiency virus for blood donations.
abstract: OBJECTIVE
  To investigate the performance of the commercial Roche COBAS AmpliScreen assay, and demonstrate whether the COBAS AmpliScreen human immunodeficiency virus-1 (HIV-1) test, v1.5, and COBAS AmpliScreen hepatitis C virus (HCV) v 2.0 for screening for HIV-1 and HCV RNA in the donated blood units from which plasma mini pools were collected, by nucleic acid amplification technology (NAT), could detect the positive pools and reduce the risk of transmission of infections for those routinely tested by serological assays.
  
  
  METHODS
  The study was performed on 3288 plasma samples collected from blood donors in a period of 13 months, from August 2004 to August 2005, at Al-Hada Armed Forces Hospital, Molecular Pathology Laboratory, Taif, Kingdom of Saudi Arabia. The samples were tested by the reverse transcriptase polymerase chain reaction (RT-PCR) after RNA extraction (this represents the major method in NAT assays), in parallel with the routine serological testing to detect qualitatively for HIV-1 and HCV.
  
  
  RESULTS
  The NAT assays that include an automated COBAS AmpliPrep system for RNA extraction and COBAS Amplicor Analyzer using AmpliScreen kits for RT-PCR assays, and the routine serological screening assays for the detection of the HIV-1 and HCV RNA in the plasma samples from the blood donors have shown to be a reliable combination that would meet our requirements. The collected data further confirms the results from the serological assays and enables us to decrease the residual risk of transmission to a minimum with the finding of no seronegative window period donation. The results demonstrate that out of 3288 samples, the percentages of RT-PCR (NAT) negative blood donations that were also confirmed as seronegative were 99% for HCV, and 99.1% for HIV-1.
  
  
  CONCLUSIONS
  The modified combined systems (automated COBAS AmpliPrep system for RNA extraction and COBAS Amplicor Analyzer using AmpliScreen kits for RT-PCR assays) for NAT screening assays has allowed the release of all blood donations supplied in the specified period of the study with no seronegative window period donations. This facilitates keeping the residual risk of transmission of HIV-1 and HCV to its minimum through blood transfusion.
authors.affiliation: Department of Molecular Pathology, Al-Hada Armed Forces Hospital, Taif, Kingdom of Saudi Arabia. mbamaga@hotmail.com
authors.forename: Mohammad S
authors.initials: MS
authors.lastname: Bamaga
authors.forename: Fawzi F
authors.initials: FF
authors.lastname: Bokhari
authors.forename: AbdulRahaman M
authors.initials: AM
authors.lastname: Aboud
authors.forename: Meshal
authors.initials: M
authors.lastname: Al-Malki
authors.forename: Faris Q
authors.initials: FQ
authors.lastname: Alenzi
mesh_terms: D001782:Blood Donors; D018562:Disease Transmission, Infectious / Q000517:prevention & control; D015497:HIV-1 / Q000302:isolation & purification*; D016174:Hepacivirus / Q000302:isolation & purification*; D006801:Humans; D008403:Mass Screening; D021141:Nucleic Acid Amplification Techniques; D012367:RNA, Viral / Q000302:isolation & purification; D015203:Reproducibility of Results; D020133:Reverse Transcriptase Polymerase Chain Reaction; D012529:Saudi Arabia
chemical_list: D012367:RNA, Viral