title: Relative strength of cation-pi vs salt-bridge interactions: the Gtalpha(340-350) peptide/rhodopsin system.
abstract: Interactions between cationic and aromatic side chains of amino acid residues, the so-called cation-pi interaction, are thought to contribute to the overall stability of the folded structure of peptides and proteins. The transferred NOE NMR structure of the G(t)alpha(340-350) peptide bound to photoactivated rhodopsin (R*) geometrically suggests a cation-pi interaction stabilizing the structure between the epsilon-amine of Lys341 and the aromatic ring of the C-terminal residue, Phe350. This interaction has been explored by varying substituents on the phenyl ring to alter the electron density of the aromatic ring of Phe350 and observing the impact on binding of the peptide to R*. The results suggest that while a cation-pi interaction geometrically exists in the G(t)alpha(340-350) peptide when bound to R*, its energetic contribution to the stability of the receptor-bound structure is relatively insignificant, as it was not observed experimentally. The presence of an adjacent and competing salt-bridge interaction between the epsilon-amine of Lys341 and the C-terminal carboxylate of Phe350 effectively shields the charge of the ammonium group. Experimental data supporting a significant cation-pi interaction can be regained through a series of Phe350 analogues where the C-terminal carboxyl has been converted to the neutral carboxamide, thus eliminating the shielding salt-bridge. TrNOE NMR experiments confirmed the existence of the cation-pi interaction in the carboxamide analogues. Various literature estimates of the strength of cation-pi interactions, including some that estimate strengths in excess of salt-bridges, are compromised by omission of the relevant anion in the calculations.
authors.affiliation: Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
authors.forename: Matthew A
authors.initials: MA
authors.lastname: Anderson
authors.forename: Benhur
authors.initials: B
authors.lastname: Ogbay
authors.forename: Rieko
authors.initials: R
authors.lastname: Arimoto
authors.forename: Wei
authors.initials: W
authors.lastname: Sha
authors.forename: Oleg G
authors.initials: OG
authors.lastname: Kisselev
authors.forename: David P
authors.initials: DP
authors.lastname: Cistola
authors.forename: Garland R
authors.initials: GR
authors.lastname: Marshall
mesh_terms: D000465:Algorithms; D000577:Amides / Q000737:chemistry; D000595:Amino Acid Sequence; D001665:Binding Sites; D002264:Carboxylic Acids / Q000737:chemistry; D002412:Cations / Q000737:chemistry*; D008239:Lysine / Q000737:chemistry; D009682:Magnetic Resonance Spectroscopy; D008969:Molecular Sequence Data; D010455:Peptides / Q000737:chemistry*; D010649:Phenylalanine / Q000737:chemistry; D011487:Protein Conformation; D012243:Rhodopsin / Q000737:chemistry*; D012492:Salts / Q000737:chemistry*
chemical_list: D000577:Amides; D002264:Carboxylic Acids; D002412:Cations; D010455:Peptides; D012492:Salts; D010649:Phenylalanine; D012243:Rhodopsin; D008239:Lysine