title: Ordering in a glycine-rich peptide conjugate: microscopic, fluorescence, and metalation studies.
abstract: Glycine residues play an intriguing role in peptide/protein structure where they can act as tightly packing amino acids with flexible bond angles. For example, structural role of glycines is highlighted in natural silk fibers where different structural polymorphs have been reported. This study deals with a glycine-rich segment from the conserved octarepeat (PHGGGWGQ) in prion protein. We have synthesized a bis-conjugate 3, containing a truncated pentapeptide segment (GGGWG), to study its time-dependent solution phase aggregation by a combination of microscopic methods and fluorescence. This discontinuous peptide conjugate 3 exhibited interesting photophysical properties upon self-assembly allowing us to propose a possible model of peptide filament formation. Taking note of the fact that prion octarepeats bind copper, we also demonstrate the ability of this conjugate to bind copper and the growth and ultrastructure of metallized fibers formed upon incubation. Enforcing peptide fiber formation in metal binding motifs offers an entry into metal impregnated fibers for possible nanobiotechnological applications.
authors.affiliation: Department of Chemistry, Indian Institute of Technology-Kanpur, Kanpur-208 016 (UP) India.
authors.forename: K Krishna
authors.initials: KK
authors.lastname: Prasad
authors.forename: Sandeep
authors.initials: S
authors.lastname: Verma
mesh_terms: D000595:Amino Acid Sequence; D001665:Binding Sites; D017124:Conserved Sequence; D003300:Copper / Q000737:chemistry; D019281:Dimerization; D005998:Glycine / Q000737:chemistry*; D018625:Microscopy, Atomic Force; D010446:Peptide Fragments / Q000138:chemical synthesis / Q000737:chemistry*; D011328:Prions / Q000737:chemistry*; D011485:Protein Binding; D013050:Spectrometry, Fluorescence
chemical_list: D010446:Peptide Fragments; D011328:Prions; D003300:Copper; D005998:Glycine