title: Molecular systematics of Helicoma, Helicomyces and Helicosporium and their teleomorphs inferred from rDNA sequences.
abstract: Three genera of asexual, helical-spored fungi, Helicoma, Helicomyces and Helicosporium traditionally have been differentiated by the morphology of their conidia and conidiophores. In this paper we assessed their phylogenetic relationships from ribosomal sequences from ITS, 5.8S and partial LSU regions using maximum parsimony, maximum likelihood and Bayesian analysis. Forty-five isolates from the three genera were closely related and were within the teleomorphic genus Tubeufia sensu Barr (Tubeufiaceae, Ascomycota). Most of the species could be placed in one of the seven clades that each received 78% or greater bootstrap support. However none of the anamorphic genera were monophyletic and all but one of the clades contained species from more than one genus. The 15 isolates of Helicoma were scattered through the phylogeny and appeared in five of the clades. None of the four sections within the genus were monophyletic, although species from Helicoma sect. helicoma were concentrated in Clade A. The Helicosporium species also appeared in five clades. The four Helicomyces species were distributed among three clades. Most of the clades supported by sequence data lacked unifying morphological characters. Traditional characters such as the thickness of the conidial filament and whether conidiophores were conspicuous or reduced proved to be poor predictors of phylogenetic relationships. However some combinations of characters including conidium colour and the presence of lateral, tooth-like conidiogenous cells did appear to be predictive of genetic relationships.
authors.affiliation: Department of Botany, University of British Columbia, Vancouver, Canada. clement@mail.botany.ubc.ca
authors.forename: Clement K M
authors.initials: CK
authors.lastname: Tsui
authors.forename: Somsak
authors.initials: S
authors.lastname: Sivichai
authors.forename: Mary L
authors.initials: ML
authors.lastname: Berbee
mesh_terms: D001203:Ascomycota / Q000145:classification* / Q000166:cytology / Q000235:genetics*; D004271:DNA, Fungal / Q000737:chemistry / Q000235:genetics; D021901:DNA, Intergenic / Q000737:chemistry / Q000235:genetics; D008853:Microscopy; D003904:Mitosporic Fungi / Q000145:classification* / Q000166:cytology / Q000235:genetics*; D008969:Molecular Sequence Data; D010784:Photomicrography; D010802:Phylogeny; D010858:Pigmentation; D012313:RNA / Q000737:chemistry / Q000235:genetics; D012335:RNA, Ribosomal / Q000235:genetics; D012340:RNA, Ribosomal, 5.8S / Q000235:genetics; D017422:Sequence Analysis, DNA; D013172:Spores, Fungal / Q000166:cytology
chemical_list: D004271:DNA, Fungal; D021901:DNA, Intergenic; D012335:RNA, Ribosomal; D012340:RNA, Ribosomal, 5.8S; C065096:RNA, ribosomal, 26S; D012313:RNA