[Microsatellite analysis of genetic diversity of Aristichthys nobilis in China].
Seventeen microsatellite markers of Aristichthys nobilis previously discovered by our lab were selected to analyze the genetic diversity and characteristics of two populations of Aristichthys nobilis from Jiangxi and Sichuan provinces. The following parameters were calculated: heterozygosity, polymorphism information content (PIC), valid allele number, allele frequency, genetic distance, genetic similarity coefficient, Hardy-Weinberg balance deflection index and so on. Results show that there are 4 monomorphic and 13 polymorphic markers among the 17 selected microsatellite markers. The average of allele number in each microsatellite locus of the Jiangxi population and Sichuan populations is 3.325 and 3.882, respectively; the average valid allele number is 3.531 and 2.676, respectively; and the number of total alleles of these 17 microsatellite loci is 71. The PIC of polymorphic loci varies between 0.077-0.960, and the average PIC is 0.417. The average observed heterozygosity (Ho) of two populations is 0.385 and 0.360, respectively and the average expected heterzygosity (He) is 0.452 and 0.422, respectively. The genetic similarity coefficient of two populations of Aristichthys nobilis is 0.897 and the genetic distance of these populations is 0.109.
Geng
Bo
B
Heilongjiang River Fishery Research Institute, Chinese Academy of Fishery Science, Harbin 150070, China. ppgeng@sina.com
Sun
Xiao-Wen
XW
Liang
Li-Qun
LQ
Ouyang
Hong-Sheng
HS
Tong
Jin-Gou
JG
D000483:Alleles; D000818:Animals; D002681:China; D003530:Cyprinidae / Q000235:genetics*; D014644:Genetic Variation; D018895:Microsatellite Repeats