title: Merozoite surface protein-3alpha is a reliable marker for population genetic analysis of Plasmodium vivax.
abstract: BACKGROUND
  The knowledge on population structure of the parasite isolates has contributed greatly to understanding the dynamics of the disease transmission for designing and evaluating malaria vaccines as well as for drug applications. msp-1 and msp-3alpha genes have been used as a genetic marker in population studies of Plasmodium vivax isolates. In this study, msp-3alpha was compared and assessed with msp-1 marker in order to find whether msp-3alpha is a reliable genetic marker for P. vivax population studies.
  
  
  METHODS
  This comparative study was designed and carried out as the first assessment of diversity in Pvmsp-3alpha gene by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) in the 50 northern and 94 southern P. vivax isolates from Iran, which had been analysed before for msp-1 gene.
  
  
  RESULTS
  Three allele size as, Type A (1.8 kb), Type B (1.5 kb) and Type C (1.2 kb) have been detected among both northern and southern isolates based on PCR results. Type C (70%) and Type A (68.7%) were the predominant fragments among northern and southern parasites, respectively. 99 distinct Pvmsp-3alpha fragments defined by the size were detected in the 94 southern samples by PCR analysis. However, no mixed genotype infections have been detected among northern isolates. Based on restriction pattern from digestion with Hha I and Alu I 12 and 49 distinct allelic variants have been detected among 50 northern and 94 southern isolates. However, based on msp-1 gene, 30 distinct variants identified in all 146-sequenced Iranian P. vivax isolate.
  
  
  CONCLUSIONS
  The results suggested that PCR-RFLP on msp-3alpha gene is an adequate, applicable and easily used technique for molecular epidemiology studies of P. vivax isolates without the need for further sequencing analysis.
authors.affiliation: Malaria Research Group, Biotechnology Department, Pasteur Institute of Iran, Pasteur Avenue, Tehran, Iran. zakeris@yahoo.com
authors.forename: Sedigheh
authors.initials: S
authors.lastname: Zakeri
authors.forename: Hesam
authors.initials: H
authors.lastname: Barjesteh
authors.forename: Navid D
authors.initials: ND
authors.lastname: Djadid
mesh_terms: D000483:Alleles; D000818:Animals; D000953:Antigens, Protozoan / Q000235:genetics*; D005819:Genetic Markers; D014644:Genetic Variation; D010966:Plasmodium vivax / Q000235:genetics* / Q000302:isolation & purification; D016133:Polymerase Chain Reaction; D012150:Polymorphism, Restriction Fragment Length; D015800:Protozoan Proteins / Q000235:genetics*
chemical_list: D000953:Antigens, Protozoan; D005819:Genetic Markers; D015800:Protozoan Proteins; C089133:merozoite surface protein 3, Plasmodium