title: Effects of fluorine substitution on the edge-to-face interaction of the benzene dimer.
abstract: To gain some insight into the effects of fluorination on the aromatic-aromatic interactions found in protein-ligand complexes, like those observed in the set of N-(4-sulfamylbenzoyl)benzylamine (SBB) inhibitors bound to Human Carbonic Anhydrase II (HCAII), we have produced potential energy curves for the edge-to-face interactions of a set of fluorinated benzene dimer compounds. All calculations were carried out at the MP2/aug-cc-pVDZ level of theory using the counterpoise method of Boys and Bernardi (Boys, S. F.; Bernardi, F. Mol. Phys. 1970, 19, 553) to account for the basis set superposition error. Fluorine substitutions are made onto the face molecule of the edge-to-face benzene dimer. As one might expect, the substitution of additional fluorines into this system generally resulted in a decrease of the binding energy. It was also found that the positioning of the fluorine substituents on isosubstituted compounds has a large effect on the total binding energy of these types of systems. More specifically, complexes with fluorines that are substituted closer to the hydrogen atoms of the edge benzene will tend to be stabilized by an electrostatic interaction between the partially negative fluorine atoms and the partially positive hydrogen atoms. However, our findings do not explain the recent crystallographic findings for the SBB-HCAII protein-ligand complex, where increased fluorination resulted in closer edge-to-face contacts, which suggests that there are factors, other than edge-to-face aromatic interactions, influencing this system's behavior.
authors.affiliation: 104 Chemistry Building, Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, USA.
authors.forename: Kevin E
authors.initials: KE
authors.lastname: Riley
authors.forename: Kenneth M
authors.initials: KM
authors.lastname: Merz
mesh_terms: D001555:Benzene Derivatives / Q000737:chemistry*; D055598:Chemical Phenomena; D002627:Chemistry, Physical; D004735:Energy Transfer; D005461:Fluorine / Q000737:chemistry*; D006859:Hydrogen / Q000737:chemistry; D008958:Models, Molecular
chemical_list: D001555:Benzene Derivatives; D005461:Fluorine; D006859:Hydrogen