title: Predominance of interaction among wild-type alleles of CYP11B2 in Himalayan natives associates with high-altitude adaptation.
abstract: Sojourners visiting high-altitude (HA) (>2500 m) are susceptible to HA disorders; on the contrary, HA natives are well adapted to the extreme hypoxic environment. High aldosterone levels are believed to be involved in HA disorders, we, therefore, envisaged role of CYP11B2 gene variants in HA adaptation and therefore investigated the -344T/C, intron-2 conversion (Iw/Ic), K173R, and A5160C polymorphisms. In addition, polymorphisms in AGT, AT1R, ATP1A1, ADRB2, and GSTP1 genes were also investigated. The study comprised of 662 subjects, comprising of 426 Himalayan highlanders (HLs) and 236 lowlanders (LLs). The -344T/C and K173R polymorphisms were found to be in complete linkage disequilibrium. The wild-type allele -344T and combination of wild-type homozygous genotypes between -344T/C, Iw/Ic, and A5160C polymorphisms, containing all the six wild-type alleles were over-represented in the HLs (p < 0.0001, and p = 0.008, respectively). The wild-type haplotypes -344T-Iw, -344T-5160A, and -344T-Iw-5160A also showed over-representation in the HLs (p < 0.0001). Furthermore, greater the number of wild-type alleles, lower was the ARR (p < 0.05). The genotype distribution in remaining genes did not differ. To conclude, the over-representation of wild-type -344T allele, genotype combinations and haplotypes of CYP11B2, and their correlation with lower aldosterone levels associate with HA adaptation in the HLs. Such an allelic presentation in sojourners may help them cope with adverse HA environment.
authors.affiliation: Institute of Genomics and Integrative Biology, Delhi 110 007, India.
authors.forename: Charu
authors.initials: C
authors.lastname: Rajput
authors.forename: Ehtesham
authors.initials: E
authors.lastname: Arif
authors.forename: Arpana
authors.initials: A
authors.lastname: Vibhuti
authors.forename: Tsering
authors.initials: T
authors.lastname: Stobdan
authors.forename: Amjad P
authors.initials: AP
authors.lastname: Khan
authors.forename: Tsering
authors.initials: T
authors.lastname: Norboo
authors.forename: Farhat
authors.initials: F
authors.lastname: Afrin
authors.forename: M A
authors.initials: MA
authors.lastname: Qadar Pasha
mesh_terms: D000222:Adaptation, Physiological / Q000235:genetics*; D000450:Aldosterone / Q000097:blood; D000531:Altitude; D000532:Altitude Sickness / Q000235:genetics*; D019405:Cytochrome P-450 CYP11B2 / Q000235:genetics*; D005787:Gene Frequency; D006801:Humans; D015810:Linkage Disequilibrium; D011110:Polymorphism, Genetic
chemical_list: D000450:Aldosterone; D019405:Cytochrome P-450 CYP11B2