Molecular evolution of serine/arginine splicing factors family (SR) by positive selection.
The serine-rich (SR) protein family is involved in the pre-mRNA splicing process and the DNA sequences of the corresponding genes are highly conserved in the metazoan organisms. The mammalian SR proteins consist of one or two characteristic RNA binding domains (RBD), containing the signature sequences RDAEDA and SWQDLKD and a RS (arginine/serine-rich) domain. We used the amino acid and nucleotide sequences deposited in GenBank and Swiss-Prot databases to perform a phylogenetic analysis using bioinformatics tools. The results of the phylogenetic trees suggest that this family has evolved by several gene duplication events as a result of a positive selection mechanism.
Escobar
Andrés J Gutiérrez
AJ
Grupo de Parasitología Molecular (GEPAMOL), Centro de Investigaciones Biomédicas, Facultad de Ciencias de la Salud, Universidad del Quindío, Armenia, Colombia.
Arenas
Aylan Farid
AF
Gómez-Marin
Jorge Enrique
JE
D000595:Amino Acid Sequence; D000818:Animals; D030541:Databases, Genetic; D019143:Evolution, Molecular; D020440:Gene Duplication; D017125:Genes, Protozoan; D006801:Humans; D009687:Nuclear Proteins / Q000737:chemistry / Q000235:genetics*; D010802:Phylogeny; D017434:Protein Structure, Tertiary; D012326:RNA Splicing; D016601:RNA-Binding Proteins / Q000737:chemistry / Q000235:genetics*; D012641:Selection, Genetic; D016415:Sequence Alignment; D000068103:Serine-Arginine Splicing Factors; D014122:Toxoplasma / Q000235:genetics
D009687:Nuclear Proteins; D016601:RNA-Binding Proteins; D000068103:Serine-Arginine Splicing Factors