title: Bio3d: an R package for the comparative analysis of protein structures.
abstract: An automated procedure for the analysis of homologous protein structures has been developed. The method facilitates the characterization of internal conformational differences and inter-conformer relationships and provides a framework for the analysis of protein structural evolution. The method is implemented in bio3d, an R package for the exploratory analysis of structure and sequence data.
  
  
  BACKGROUND
  The bio3d package is distributed with full source code as a platform-independent R package under a GPL2 license from: http://mccammon.ucsd.edu/~bgrant/bio3d/
authors.affiliation: Department of Chemistry and Biochemistry, University of California, San Diego La Jolla, CA 92093, USA. bgrant@mccammon.ucsd.edu
authors.forename: Barry J
authors.initials: BJ
authors.lastname: Grant
authors.forename: Ana P C
authors.initials: AP
authors.lastname: Rodrigues
authors.forename: Karim M
authors.initials: KM
authors.lastname: ElSawy
authors.forename: J Andrew
authors.initials: JA
authors.lastname: McCammon
authors.forename: Leo S D
authors.initials: LS
authors.lastname: Caves
mesh_terms: D000595:Amino Acid Sequence; D003198:Computer Simulation; D020407:Internet; D008956:Models, Chemical; D008958:Models, Molecular; D008969:Molecular Sequence Data; D011487:Protein Conformation; D011506:Proteins / Q000737:chemistry*; D020539:Sequence Analysis, Protein / Q000379:methods*; D012984:Software; D014584:User-Computer Interface
chemical_list: D011506:Proteins