The nature of halogen...halogen synthons: crystallographic and theoretical studies.
A study of the halogen...halogen contacts in organic compounds using ab initio calculations and the results of previously reported crystallographic studies show that these interactions are controlled by electrostatics. These contacts can be represented by the geometric parameters of the C--X1...X2--C moieties (where theta1=C--X1...X2 and theta2=X1...X2--C; ri=X1...X2 distance). The distributions of the contacts within the sum of van der Waals radii (rvdW) versus thetai (theta1=theta2) show a maximum at theta approximately 150 degrees for X=Cl, Br, and I. This maximum is not seen in the distribution of F...F contacts. These results are in good agreement with our ab initio calculations. The theoretical results show that the position of the maximum depends on three factors: 1) The type of halogen atom, 2) the hybridization of the ipso carbon atom, and 3) the nature of the other atoms that are bonded to the ipso carbon atom apart from the halogen atom. Calculations show that the strength of these contacts decreases in the following order: I...I>Br...Br>Cl...Cl. Their relative strengths decrease as a function of the hybridization of the ipso carbon atom in the following order: sp2>sp>sp3. Attaching an electronegative atom to the carbon atom strengthens the halogen...halogen contacts. An electrostatic model is proposed based on two assumptions: 1) The presence of a positive electrostatic end cap on the halogen atom (except for fluorine) and 2) the electronic charge is anisotropically distributed around the halogen atom.
Awwadi
Firas F
FF
Department of Chemistry, Jordan University of Science and Technology, Irbid, Jordan. fawwadi@yahoo.com
Willett
Roger D
RD
Peterson
Kirk A
KA
Twamley
Brendan
B
D000465:Algorithms; D016880:Anisotropy; D002244:Carbon / Q000737:chemistry; D018360:Crystallography, X-Ray / Q000379:methods*; D006219:Halogens / Q000737:chemistry*; D008962:Models, Theoretical; D008968:Molecular Conformation; D013816:Thermodynamics
D006219:Halogens; D002244:Carbon