Ice-active characteristics of soil bacteria selected by ice-affinity.
As an initial screen for microorganisms that produce ice-active macromolecules, ice-affinity was used to select microorganisms from soil consortia originating from three temperate regions. Once selected and subsequently purified to single colonies, these microbes were putatively identified by 16S ribosomal RNA sequencing and assayed for various ice-active properties. Ice-affinity selection appeared to select for bacteria with ice-associating activities: inhibition of ice recrystallization; ice nucleation; ice shaping. Although none of these activities were observed in Paenibacillus amyloliticus C8, others such as Chryseobacterium sp. GL8, demonstrated both ice recrystallization inhibition and ice-shaping activities. Pseudomonas borealis DL7 was classified as a type I ice nucleator, Flavobacterium sp. GL7, was identified as a type III ice nucleator and Acinetobacter radioresistens DL5 demonstrated ice recrystallization inhibition. In all, 19 different culturable bacteria were selected from the thousands of microbes in late-summer collected soil samples. Many of the selected microbes have been previously reported in glacial ice cores or polar sea ice, and of five isolates that were further characterized, four showed ice-associating activities. These results indicate the significant potential of ice-affinity selection even with temperate climate soils, suggesting that sampling in more extreme and remote areas is not required for the isolation of ice-active bacteria.
Wilson
Sandra L
SL
Department of Biology, Queens University, Kingston, Ontario, Canada, K7L 3N6.
Kelley
Deborah L
DL
Walker
Virginia K
VK
D000150:Acinetobacter / Q000502:physiology; D021301:Antifreeze Proteins / Q000502:physiology; D001425:Bacterial Outer Membrane Proteins / Q000502:physiology; D002170:Canada; D045247:Chryseobacterium / Q000502:physiology; D003081:Cold Climate; D015169:Colony Count, Microbial; D004926:Escherichia coli / Q000502:physiology; D005417:Flavobacterium / Q000502:physiology; D016946:Gram-Negative Aerobic Rods and Cocci / Q000502:physiology*; D007053:Ice; D016133:Polymerase Chain Reaction; D011549:Pseudomonas / Q000502:physiology; D012988:Soil Microbiology
D021301:Antifreeze Proteins; D001425:Bacterial Outer Membrane Proteins; D007053:Ice; C063113:ice nucleation protein