title: hCLE/CGI-99, a human protein that interacts with the influenza virus polymerase, is a mRNA transcription modulator.
abstract: The human protein hCLE was previously identified by its interaction with the PA subunit of influenza virus polymerase. It exhibits a sequence similarity of 38% with the yeast Spt16 component of the FACT complex, which is involved in transcriptional regulation. Therefore, we studied the possible relationship of hCLE with the transcription machinery. Here we show that hCLE and different phosphorylated forms of the RNA polymerase II (RNAP II) largest subunit, co-immunoprecipitate and colocalize by confocal microscopy analysis. Furthermore, hCLE was found in nuclear sites of active mRNA synthesis, as demonstrated by its colocalization with spots of in situ Br-UTP incorporation. Silencing of hCLE expression by RNA interference inhibited the synthesis of RNAP II transcripts around 50%. Accordingly, the expression profiling in hCLE-silenced cells studied by microarray analysis showed that, among the genes that exhibited a differential expression under hCLE silencing, more than 90% were down-regulated. Collectively these results indicate that hCLE works as a positive modulator of the RNA polymerase II activity.
authors.affiliation: Centro Nacional de Biotecnología, Cantoblanco, 28049 Madrid, Spain.
authors.forename: Alicia
authors.initials: A
authors.lastname: Pérez-González
authors.forename: Ariel
authors.initials: A
authors.lastname: Rodriguez
authors.forename: Maite
authors.initials: M
authors.lastname: Huarte
authors.forename: Iñigo J
authors.initials: IJ
authors.lastname: Salanueva
authors.forename: Amelia
authors.initials: A
authors.lastname: Nieto
mesh_terms: D000818:Animals; D002460:Cell Line; D004285:Dogs; D005786:Gene Expression Regulation; D006801:Humans; D007668:Kidney / Q000166:cytology; D020411:Oligonucleotide Array Sequence Analysis; D009975:Orthomyxoviridae / Q000201:enzymology*; D011233:Precipitin Tests; D012313:RNA / Q000096:biosynthesis; D034622:RNA Interference; D012319:RNA Polymerase II / Q000235:genetics / Q000378:metabolism*; D012333:RNA, Messenger / Q000235:genetics / Q000378:metabolism; D015534:Trans-Activators / Q000235:genetics / Q000378:metabolism*; D014158:Transcription, Genetic
chemical_list: D012333:RNA, Messenger; C435504:RTRAF protein, human; D015534:Trans-Activators; D012313:RNA; D012319:RNA Polymerase II