Sequential gene expression profiling in lung transplant recipients with chronic rejection.
OBJECTIVE
Chronic allograft rejection is the leading cause of morbidity and mortality for long-term survivors of lung transplantation. Previous studies have implicated only isolated genes in the development of chronic rejection and have not examined multiple pathways in an individual concurrently. Using microarray technology, we identified and compared gene expression profiling in lung transplant recipients with and without chronic rejection, and follow sequential expression of genes differentially expressed between the two groups.


METHODS
Prospective, cohort study.


METHODS
Single lung transplant center.


METHODS
Eleven transplant recipients with chronic rejection were matched with 9 control transplant recipients.


METHODS
All recipients underwent surveillance bronchoscopies at predetermined times to rule out infection and/or acute rejection. Gene expression profiling was obtained from hybridizing BAL fluid cell RNA to a 96-gene microarray.


RESULTS
Fifteen genes were found to be significantly differentially expressed between the two patient groups, and they are involved in inflammatory, fibrotic, and apoptotic pathways. Temporal expression of the significant genes demonstrated a change in their levels at the onset of chronic rejection, with normalization to prerejection levels as rejection continued.


CONCLUSIONS
We conclude that microarray technology is valuable in studying the mechanism of chronic lung rejection, and the expression of genes in multiple pathways is elevated in patients with chronic lung rejection.
Lu
Brandon S
BS
Department of Neurology (Dr. Lu), Northwestern University, Feinberg School of Medicine, Chicago, IL, USA.
Yu
Andrew D
AD
Zhu
Xiaofeng
X
Garrity
Edward R
ER
Vigneswaran
Wickii T
WT
Bhorade
Sangeeta M
SM
D000328:Adult; D017209:Apoptosis / Q000235:genetics / Q000502:physiology; D001483:Base Sequence / Q000235:genetics*; D001989:Bronchiolitis Obliterans / Q000209:etiology / Q000473:pathology / Q000503:physiopathology; D015331:Cohort Studies; D005260:Female; D020869:Gene Expression Profiling; D005786:Gene Expression Regulation / Q000502:physiology; D006084:Graft Rejection / Q000209:etiology / Q000235:genetics* / Q000473:pathology; D006801:Humans; D007249:Inflammation / Q000235:genetics / Q000473:pathology / Q000503:physiopathology; D008168:Lung / Q000473:pathology / Q000503:physiopathology; D016040:Lung Transplantation / Q000473:pathology*; D008297:Male; D008875:Middle Aged; D005810:Multigene Family / Q000235:genetics; D020411:Oligonucleotide Array Sequence Analysis; D011446:Prospective Studies; D011658:Pulmonary Fibrosis / Q000235:genetics / Q000473:pathology / Q000503:physiopathology; D012313:RNA / Q000235:genetics; D014180:Transplantation / Q000473:pathology*
D012313:RNA