title: Prediction of human microRNA targets.
abstract: MicroRNAs (miRNAs) are small, nonprotein-coding RNAs that regulate gene expression. Although hundreds of human miRNA genes have been discovered, the functions of most of these are unknown. Computational predictions indicate that miRNAs, which account for at least 1% of human protein-coding genes, regulate protein production for thousands of or possibly all of human genes. We discuss the functions of mammalian miRNAs and the experimental and computational methods used to detect and predict human miRNA target genes. Anticipating their impact on genome-wide discovery of miRNA targets, we describe the various computational tools and web-based resources available to predict miRNA targets.
authors.affiliation: Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.
authors.forename: Bino
authors.initials: B
authors.lastname: John
authors.forename: Chris
authors.initials: C
authors.lastname: Sander
authors.forename: Debora S
authors.initials: DS
authors.lastname: Marks
mesh_terms: D020413:3' Untranslated Regions; D001665:Binding Sites; D019295:Computational Biology / Q000379:methods; D030541:Databases, Genetic; D005786:Gene Expression Regulation; D020868:Gene Silencing; D006801:Humans; D020407:Internet; D035683:MicroRNAs / Q000737:chemistry / Q000235:genetics* / Q000378:metabolism*; D014176:Protein Biosynthesis; D012333:RNA, Messenger / Q000378:metabolism
chemical_list: D020413:3' Untranslated Regions; D035683:MicroRNAs; D012333:RNA, Messenger