title: PhyloFacts: an online structural phylogenomic encyclopedia for protein functional and structural classification.
abstract: The Berkeley Phylogenomics Group presents PhyloFacts, a structural phylogenomic encyclopedia containing almost 10,000 'books' for protein families and domains, with pre-calculated structural, functional and evolutionary analyses. PhyloFacts enables biologists to avoid the systematic errors associated with function prediction by homology through the integration of a variety of experimental data and bioinformatics methods in an evolutionary framework. Users can submit sequences for classification to families and functional subfamilies. PhyloFacts is available as a worldwide web resource from http://phylogenomics.berkeley.edu/phylofacts.
authors.affiliation: Department of Bioengineering, 473 Evans Hall #1762, University of California, Berkeley, CA 94720, USA.
authors.forename: Nandini
authors.initials: N
authors.lastname: Krishnamurthy
authors.forename: Duncan P
authors.initials: DP
authors.lastname: Brown
authors.forename: Dan
authors.initials: D
authors.lastname: Kirshner
authors.forename: Kimmen
authors.initials: K
authors.lastname: Sjölander
mesh_terms: D000818:Animals; D030562:Databases, Protein; D019143:Evolution, Molecular; D006801:Humans; D010802:Phylogeny; D017434:Protein Structure, Tertiary; D011506:Proteins / Q000737:chemistry / Q000145:classification / Q000235:genetics; D013329:Structure-Activity Relationship
chemical_list: D011506:Proteins