title: Prevalence and molecular characterization of human group C rotaviruses in Hungary.
abstract: BACKGROUND
  Group C rotaviruses are recognized enteric pathogens of humans and animals. Human group C rotaviruses have been associated with sporadic episodes and large outbreaks of gastroenteritis in children and adults but their epidemiology and ecology are still unexplored.
  
  
  OBJECTIVE
  To collect epidemiological data on group C rotavirus infections among children with gastroenteritis in Hungary and perform molecular characterization on the identified strains.
  
  
  METHODS
  Fecal samples were collected during the 2003 surveillance in Baranya County, Hungary. The presence of group C rotavirus RNA was investigated by polyacrylamide gel electrophoresis and by reverse transcription-nested polymerase chain reaction for the VP6 gene. The identified strains were further characterized by sequencing and phylogenetic analysis of the VP7, VP6, VP4, and NSP4 genes.
  
  
  RESULTS
  Three of 472 samples (0.6%) tested positive for group C rotavirus. Two samples were selected for molecular analysis. Strains BaC 6104/03 and BaC 11549/03 displayed an overall identity of >99.8% and 99.3% at the nucleotide and amino acid level, respectively. The VP7 of the strain BaC 6104/03 was most closely related (99.5% aa) to the Nigerian strain Jajeri, while the VP4s of strains BaC 6104/03 and BaC 11549/03 were more similar (98.1% aa) to strains Belem and 208, detected in Brazil and China, respectively.
  
  
  CONCLUSIONS
  Based on this 1-year study, we conclude that group C rotaviruses are not of epidemiological relevance in the etiology of childhood acute gastroenteritis in Hungary. The low sequence divergence between the Hungarian strains suggested that a single group C rotavirus strain circulated in this period in the study area.
authors.affiliation: Regional Laboratory of Virology, Baranya County Institute of State Public Health Service, Szabadság út 7., H-7623 Pécs, Hungary. bkrota@hotmail.com
authors.forename: K
authors.initials: K
authors.lastname: Bányai
authors.forename: B
authors.initials: B
authors.lastname: Jiang
authors.forename: A
authors.initials: A
authors.lastname: Bogdán
authors.forename: B
authors.initials: B
authors.lastname: Horváth
authors.forename: F
authors.initials: F
authors.lastname: Jakab
authors.forename: E
authors.initials: E
authors.lastname: Meleg
authors.forename: V
authors.initials: V
authors.lastname: Martella
authors.forename: L
authors.initials: L
authors.lastname: Magyari
authors.forename: B
authors.initials: B
authors.lastname: Melegh
authors.forename: G
authors.initials: G
authors.lastname: Szucs
mesh_terms: D000293:Adolescent; D002648:Child; D002675:Child, Preschool; D003967:Diarrhea / Q000821:virology; D004591:Electrophoresis, Polyacrylamide Gel; D005243:Feces / Q000821:virology; D006801:Humans; D006814:Hungary / Q000453:epidemiology; D007223:Infant; D017720:Molecular Epidemiology; D010802:Phylogeny; D016133:Polymerase Chain Reaction; D011159:Population Surveillance; D015995:Prevalence; D012401:Rotavirus / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification; D012400:Rotavirus Infections / Q000453:epidemiology* / Q000821:virology