Water percolation governs polymorphic transitions and conductivity of DNA.
We report on the first computer simulation studies of the percolation transition of water at the surface of the DNA double helix. With increased hydration, the ensemble of small clusters merges into a spanning water network via a quasi-two-dimensional percolation transition. This transition occurs strikingly close to the hydration level where the B form of DNA becomes stable in experiment. Formation of spanning water networks results in sigmoidlike acceleration of long-range ion transport in good agreement with experiment.
Brovchenko
Ivan
I
Physical Chemistry, Dortmund University, Otto-Hahn-Strasse 6, Dortmund, D-44227, Germany. brov@heineken.chemie.uni-dortmund.de
Krukau
Aliaksei
A
Oleinikova
Alla
A
Mazur
Alexey K
AK
D001703:Biophysics / Q000379:methods*; D004247:DNA / Q000737:chemistry*; D017136:Ion Transport; D007477:Ions; D009690:Nucleic Acid Conformation; D011336:Probability; D012964:Sodium / Q000737:chemistry; D014867:Water / Q000737:chemistry*
D007477:Ions; D014867:Water; D004247:DNA; D012964:Sodium