ssSNPer: identifying statistically similar SNPs to aid interpretation of genetic association studies.
ssSNPer is a novel user-friendly web interface that provides easy determination of the number and location of untested HapMap SNPs, in the region surrounding a tested HapMap SNP, which are statistically similar and would thus produce comparable and perhaps more significant association results. Identification of ssSNPs can have crucial implications for the interpretation of the initial association results and the design of follow-up studies.


BACKGROUND
http://fraser.qimr.edu.au/general/daleN/ssSNPer/
Nyholt
Dale R
DR
Genetic Epidemiology Laboratory, QIMR 300 Herston Road, Brisbane, Queensland, 4006, Australia. daleN@qimr.edu.au
D002874:Chromosome Mapping / Q000379:methods*; D003198:Computer Simulation; D004252:DNA Mutational Analysis / Q000379:methods*; D003627:Data Interpretation, Statistical; D008040:Genetic Linkage / Q000235:genetics*; D005828:Genetics, Population; D015810:Linkage Disequilibrium / Q000235:genetics*; D008957:Models, Genetic; D015233:Models, Statistical; D020641:Polymorphism, Single Nucleotide / Q000235:genetics*; D017422:Sequence Analysis, DNA / Q000379:methods*; D012984:Software