title: Archaeal diversity in two thermophilic chalcopyrite bioleaching reactors.
abstract: This study used a culture-independent molecular approach to investigate the archaeal community composition of thermophilic bioleaching reactors. Two culture samples, MTC-A and MTC-B, grown with different concentrations of chalcopyrite (CuFeS2), a copper sulfidic ore, at a temperature of 78 degrees C and pH 1.6 were studied. Phylogenetic analysis of the 16S rRNA genes revealed that both cultures consisted of Archaea belonging to the Sulfolobales. The 16S rRNA gene clone library of MTC-A grown with 4% (w/v) chalcopyrite was dominated by a unique phylotype related to Sulfolobus shibatae (69% of total clones). The remaining clones were affiliated with Stygiolobus azoricus (11%), Metallosphaera sp. J1 (8%), Acidianus infernus (2%), and a novel phylotype related to Sulfurisphaera ohwakuensis (10%). In contrast, the clones from MTC-B grown with 12% (w/v) chalcopyrite did not appear to contain Sulfolobus shibatae-like organisms. Instead the bioleaching consortium was dominated by clones related to Sulfurisphaera ohwakuensis (73.9% of total clones). The remaining microorganisms detected were similar to those found in MTC-A.
authors.affiliation: Centre for Bacterial Diversity and Identification, School of Molecular and Microbial Sciences, University of Queensland, Brisbance, Australia.
authors.forename: Deirdre
authors.initials: D
authors.lastname: Mikkelsen
authors.forename: Ulrike
authors.initials: U
authors.lastname: Kappler
authors.forename: Alastair G
authors.initials: AG
authors.lastname: McEwan
authors.forename: Lindsay I
authors.initials: LI
authors.lastname: Sly
mesh_terms: D044822:Biodiversity; D019149:Bioreactors / Q000382:microbiology*; D003300:Copper / Q000378:metabolism*; D020459:Genes, rRNA; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D017422:Sequence Analysis, DNA; D016942:Sulfolobales / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification
chemical_list: D012336:RNA, Ribosomal, 16S; C012819:chalcopyrite; D003300:Copper