title: Quantification of two variant strains contained in freeze-dried Japanese BCG vaccine preparation by real-time PCR.
abstract: Japanese bacillus Calmette-Guerin (BCG) vaccine preparation contains two types of variant strains, Type I, which has a 22-base-pair deletion in the RD16 region, and Type II, which has an identical sequence to those of other BCG strains. In this study, we established a method to quantify the percentage of variant strain Type II contained in freeze-dried BCG product with real-time PCR. With this method we examined the master seed lot Tokyo 172, two secondary seed lots, Tokyo 172-1 and Tokyo 172-2, which were produced from Tokyo 172, and four commercial lots produced form Tokyo 172-1. Tokyo 172, Tokyo 172-1, and Tokyo 172-2 contained 55.1%, 19.5%, and 3.6% of Type II variant strain, respectively. Commercial lots contained 1.5%, 4.5%, 7.4%, and 4.3% of Type II variant strain, respectively. These results indicated that the two variant strains contained in the master seed lot continued to coexist in subsequently produced lots with a decrease in population of variant strain Type II. This method would be useful for quality control of commercial Japanese BCG vaccine preparations.
authors.affiliation: Department of Bacterial Pathogenesis and Infection Control, National Institute of Infectious Diseases, 4-7-1 Gakuen, Musashimurayama, Tokyo 208-0011, Japan. keigo@nih.go.jp
authors.forename: Keigo
authors.initials: K
authors.lastname: Shibayama
authors.forename: Keiko
authors.initials: K
authors.lastname: Mochida
authors.forename: Tetsuya
authors.initials: T
authors.lastname: Yagi
authors.forename: Shigetaro
authors.initials: S
authors.lastname: Mori
authors.forename: Yoshichika
authors.initials: Y
authors.lastname: Arakawa
authors.forename: Saburo
authors.initials: S
authors.lastname: Yamamoto
mesh_terms: D001500:BCG Vaccine / Q000235:genetics*; D001483:Base Sequence; D005612:Freeze Drying; D014644:Genetic Variation; D007564:Japan; D008969:Molecular Sequence Data; D009163:Mycobacterium bovis / Q000235:genetics*; D015341:Nucleic Acid Probes / Q000737:chemistry; D016133:Polymerase Chain Reaction; D011786:Quality Control; D012689:Sequence Homology, Nucleic Acid
chemical_list: D001500:BCG Vaccine; D015341:Nucleic Acid Probes