title: Participation of the surface structure of Pharaonis phoborhodopsin, ppR and its A149S and A149V mutants, consisting of the C-terminal alpha-helix and E-F loop, in the complex-formation with the cognate transducer pHtrII, as revealed by site-directed 13C solid-state NMR.
abstract: We have recorded 13C solid state NMR spectra of [3-13C]Ala-labeled pharaonis phoborhodopsin (ppR) and its mutants, A149S and A149V, complexed with the cognate transducer pharaonis halobacterial transducer II protein (pHtrII) (1-159), to gain insight into a possible role of their cytoplasmic surface structure including the C-terminal alpha-helix and E-F loop for stabilization of the 2:2 complex, by both cross-polarization magic angle spinning (CP-MAS) and dipolar decoupled (DD)-MAS NMR techniques. We found that 13C CP-MAS NMR spectra of [3-13C]Ala-ppR, A149S and A149V complexed with the transducer pHtrII are very similar, reflecting their conformation and dynamics changes caused by mutual interactions through the transmembrane alpha-helical surfaces. In contrast, their DD-MAS NMR spectral features are quite different between [3-13C]Ala-A149S and A149V in the complexes with pHtrII: 13C DD-MAS NMR spectrum of [3-13C]Ala-A149S complex is rather similar to that of the uncomplexed form, while the corresponding spectral feature of A149V complex is similar to that of ppR complex in the C-terminal tip region. This is because more flexible surface structure detected by the DD-MAS NMR spectra are more directly influenced by the dynamics changes than the CP-MAS NMR. It turned out, therefore, that an altered surface structure of A149S resulted in destabilized complex as viewed from the 13C NMR spectrum of the surface areas, probably because of modified conformation at the corner of the helix E in addition to the change of hydropathy. It is, therefore, concluded that the surface structure of ppR including the C-terminal alpha-helix and the E-F loops is directly involved in the stabilization of the complex through conformational stability of the helix E.
authors.affiliation: Graduate School of Engineering, Yokohama National University, Hodogaya-ku, Yokohama, Japan.
authors.forename: Izuru
authors.initials: I
authors.lastname: Kawamura
authors.forename: Yoichi
authors.initials: Y
authors.lastname: Ikeda
authors.forename: Yuki
authors.initials: Y
authors.lastname: Sudo
authors.forename: Masayuki
authors.initials: M
authors.lastname: Iwamoto
authors.forename: Kazumi
authors.initials: K
authors.lastname: Shimono
authors.forename: Satoru
authors.initials: S
authors.lastname: Yamaguchi
authors.forename: Satoru
authors.initials: S
authors.lastname: Tuzi
authors.forename: Hazime
authors.initials: H
authors.lastname: Saitô
authors.forename: Naoki
authors.initials: N
authors.lastname: Kamo
authors.forename: Akira
authors.initials: A
authors.lastname: Naito
mesh_terms: D019943:Amino Acid Substitution; D019843:Archaeal Proteins / Q000737:chemistry* / Q000528:radiation effects; D006216:Halobacteriaceae / Q000737:chemistry / Q000235:genetics / Q000528:radiation effects; D025602:Halorhodopsins / Q000737:chemistry* / Q000235:genetics* / Q000528:radiation effects; D046912:Multiprotein Complexes; D016297:Mutagenesis, Site-Directed; D019906:Nuclear Magnetic Resonance, Biomolecular; D010777:Photochemistry; D017433:Protein Structure, Secondary; D011994:Recombinant Proteins / Q000737:chemistry / Q000235:genetics / Q000528:radiation effects; D025603:Sensory Rhodopsins / Q000737:chemistry* / Q000235:genetics* / Q000528:radiation effects
chemical_list: D019843:Archaeal Proteins; D025602:Halorhodopsins; C434451:HtrII protein, Natronobacterium pharaonis; D046912:Multiprotein Complexes; D011994:Recombinant Proteins; D025603:Sensory Rhodopsins; C061508:sensory rhodopsin II protein, archaeal