Mechanism of bleomycin suicide: a Car-Parrinello molecular dynamics investigation.
Using first-principles molecular dynamics simulations (Car-Parrinello method) we investigated the possible reaction pathways for decay of the active bleomycin-Fe(III)-OOH complex, so-called bleomycin suicide. The theoretical model of activated bleomycin contains the whole metal bonding domain of the bleomycin ligand. Simulations performed both in a vacuum and in water show that a facile decaying process involves a homolytic O-O bond cleavage with an almost simultaneous hydrogen atom abstraction. The formation of an intra- or intermolecular hydrogen bond appears to be crucial for the decay of the activated bleomycin. We did not observe any evidence of heterolytic cleavage of the O-O bond of the Fe(III)-OOH species.
Karawajczyk
Anna
A
Gorlaeus Laboratories, Leiden Institute of Chemistry, P.O. Box 9502, 2300 RA Leiden, The Netherlands.
Gossens
Christian
C
Roethlisberger
Ursula
U
Buda
Francesco
F
D001761:Bleomycin / Q000737:chemistry*; D003198:Computer Simulation; D005290:Ferric Compounds / Q000737:chemistry*; D008024:Ligands; D008958:Models, Molecular
D005290:Ferric Compounds; D008024:Ligands; D001761:Bleomycin