SNP2NMD: a database of human single nucleotide polymorphisms causing nonsense-mediated mRNA decay.
Elucidating the effects of genetic polymorphisms on genes and gene networks is an important step in disease association studies. We developed the SNP2NMD database for human SNPs (single nucleotide polymorphisms) that result in PTCs (premature termination codons) and trigger nonsense-mediated mRNA decay (NMD). The SNP2NMD Web interfaces provide extensive genetic information on and graphical views of the queried SNP, gene, and disease terms.


BACKGROUND
SNP2NMD is available from http://variome.net, or directly from http://bioportal.kobic.re.kr/SNP2NMD.


BACKGROUND
http://bioportal.kobic.re.kr/SNP2NMD/Wiki.jsp?page=Statistics.
Han
Areum
A
Korean Bioinformation Center, KRIBB, Daejeon 305-806, Korea.
Kim
Woo-Yeon
WY
Park
Seong-Min
SM
D002874:Chromosome Mapping / Q000379:methods*; D018389:Codon, Nonsense / Q000235:genetics*; D004252:DNA Mutational Analysis / Q000379:methods*; D003628:Database Management Systems; D030541:Databases, Genetic; D015894:Genome, Human / Q000235:genetics*; D006801:Humans; D016247:Information Storage and Retrieval / Q000379:methods; D020407:Internet; D020641:Polymorphism, Single Nucleotide / Q000235:genetics*; D020871:RNA Stability / Q000235:genetics*
D018389:Codon, Nonsense