DDBJ working on evaluation and classification of bacterial genes in INSDC.
DNA Data Bank of Japan (DDBJ) (http://www.ddbj.nig.ac.jp) newly collected and released 12,927,184 entries or 13,787,688,598 bases in the period from July 2005 to June 2006. The released data contain honeybee expressed sequence tags (ESTs), re-examined and re-annotated complete genome data of Escherichia coli K-12 W3110, medaka WGS and human MGA. We also systematically evaluated and classified the genes in the complete bacterial genomes submitted to the International Nucleotide Sequence Database Collaboration (INSDC, http://insdc.org) that is composed of DDBJ, EMBL Bank and GenBank. The examination and classification selected 557,000 genes as reliable ones among all the bacterial genes predicted by us.
Sugawara
Hideaki
H
Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems Yata, Mishima 411-8540, Japan.
Abe
Takashi
T
Gojobori
Takashi
T
Tateno
Yoshio
Y
D000818:Animals; D002965:Classification; D030561:Databases, Nucleic Acid / Q000706:statistics & numerical data; D005069:Evaluation Studies as Topic; D005798:Genes, Bacterial; D016680:Genome, Bacterial; D006801:Humans; D020407:Internet; D016366:Open Reading Frames