BioNetBuilder: automatic integration of biological networks.
BioNetBuilder is an open-source client-server Cytoscape plugin that offers a user-friendly interface to create biological networks integrated from several databases. Users can create networks for approximately 1500 organisms, including common model organisms and human. Currently supported databases include: DIP, BIND, Prolinks, KEGG, HPRD, The BioGrid and GO, among others. The BioNetBuilder plugin client is available as a Java Webstart, providing a platform-independent network interface to these public databases.


BACKGROUND
http://err.bio.nyu.edu/cytoscape/bionetbuilder/
Avila-Campillo
Iliana
I
Department of Biology, New York University, New York, NY, USA. iliana_avila-campillo@merck.com
Drew
Kevin
K
Lin
John
J
Reiss
David J
DJ
Bonneau
Richard
R
D000465:Algorithms; D003196:Computer Graphics; D003198:Computer Simulation; D003628:Database Management Systems; D016247:Information Storage and Retrieval / Q000379:methods; D020407:Internet; D008954:Models, Biological; D020543:Proteome / Q000378:metabolism*; D015398:Signal Transduction / Q000502:physiology*; D012984:Software; D018511:Systems Integration; D014584:User-Computer Interface
D020543:Proteome