title: Pol I transcription and pre-rRNA processing are coordinated in a transcription-dependent manner in mammalian cells.
abstract: Pre-rRNA synthesis and processing are key steps in ribosome biogenesis. Although recent evidence in yeast suggests that these two processes are coupled, the nature of their association is unclear. In this report, we analyze the coordination between rDNA transcription and pre-rRNA processing in mammalian cells. We found that pol I transcription factor UBF interacts with pre-rRNA processing factors as analyzed by immunoprecipitations, and the association depends on active rRNA synthesis. In addition, injections of plasmids containing the human rDNA promoter and varying lengths of 18S rDNA into HeLa nuclei show that pol I transcription machinery can be recruited to rDNA promoters regardless of the product that is transcribed, whereas subgroups of pre-rRNA processing factors are recruited to plasmids only when specific pre-rRNA fragments are produced. Our observations suggest a model for sequential recruitment of pol I transcription factors and pre-rRNA processing factors to elongating pre-rRNA on an as-needed basis rather than corecruitment to sites of active transcription.
authors.affiliation: Department of Cell and Molecular Biology, Division of Pulmonary and Critical Care Medicine, Feinberg School of Medicine Northwestern University, Chicago, IL 60611, USA.
authors.forename: K
authors.initials: K
authors.lastname: Kopp
authors.forename: J Z
authors.initials: JZ
authors.lastname: Gasiorowski
authors.forename: D
authors.initials: D
authors.lastname: Chen
authors.forename: R
authors.initials: R
authors.lastname: Gilmore
authors.forename: J T
authors.initials: JT
authors.lastname: Norton
authors.forename: C
authors.initials: C
authors.lastname: Wang
authors.forename: D J
authors.initials: DJ
authors.lastname: Leary
authors.forename: E K L
authors.initials: EK
authors.lastname: Chan
authors.forename: D A
authors.initials: DA
authors.lastname: Dean
authors.forename: S
authors.initials: S
authors.lastname: Huang
mesh_terms: D004275:DNA, Ribosomal / Q000235:genetics*; D003609:Dactinomycin / Q000494:pharmacology; D006367:HeLa Cells; D006801:Humans; D010957:Plasmids / Q000235:genetics; D035463:Pol1 Transcription Initiation Complex Proteins / Q000032:analysis / Q000378:metabolism*; D011401:Promoter Regions, Genetic; D012322:RNA Precursors / Q000378:metabolism*; D012323:RNA Processing, Post-Transcriptional; D012335:RNA, Ribosomal / Q000378:metabolism*; D020537:RNA, Small Nucleolar / Q000378:metabolism; D012259:Ribonuclease, Pancreatic / Q000494:pharmacology; D014158:Transcription, Genetic / Q000187:drug effects
chemical_list: D004275:DNA, Ribosomal; D035463:Pol1 Transcription Initiation Complex Proteins; D012322:RNA Precursors; D012335:RNA, Ribosomal; D020537:RNA, Small Nucleolar; C063844:transcription factor UBF; D003609:Dactinomycin; D012259:Ribonuclease, Pancreatic