title: IRF5 rs2004640-T allele, the new genetic factor for systemic lupus erythematosus, is not associated with rheumatoid arthritis.
abstract: BACKGROUND
  Recently, a new genetic factor within the interferon regulatory factor 5 (IRF5) gene was demonstrated for systemic lupus erythematosus (SLE) through linkage and association: the rs2004640-T allele. IRF5 is involved in the production of rheumatoid arthritis (RA) cytokines, and SLE already shares with RA one genetic factor within the tyrosine phosphatase PTPN22 gene.
  
  
  OBJECTIVE
  To test the hypothesis that the SLE IRF5 genetic factor could also be shared with RA.
  
  
  METHODS
  100 French Caucasian trio families with RA were genotyped and analysed with the transmission disequilibrium test, the frequency comparison of the transmitted and untransmitted alleles, and the genotype relative risk. 97% power was available to detect at least a trend in favour of a factor similar to that reported for SLE.
  
  
  RESULTS
  The analysis showed the absence of linkage and association globally and in "autoimmune" RA subsets, with a weak non-significant trend against the IRF5 rs20046470-T allele. Given the robustness of familial-based analysis, this slight negative trend provided strong evidence against even a weaker factor than that reported for SLE.
  
  
  CONCLUSIONS
  Our results exclude the IRF5 rs2004640-T allele as a major genetic factor for RA in this French Caucasian population.
authors.affiliation: GenHotel-EA3886, Laboratoire Européen de Recherche pour la Polyarthrite Rhumatoïde, 2 rue Gaston Crémieux, 91057 Evry-Genopole Cedex, France. garniersophie@wanadoo.fr
authors.forename: Sophie
authors.initials: S
authors.lastname: Garnier
authors.forename: Philippe
authors.initials: P
authors.lastname: Dieudé
authors.forename: Laetitia
authors.initials: L
authors.lastname: Michou
authors.forename: Sandra
authors.initials: S
authors.lastname: Barbet
authors.forename: Alice
authors.initials: A
authors.lastname: Tan
authors.forename: Sandra
authors.initials: S
authors.lastname: Lasbleiz
authors.forename: Thomas
authors.initials: T
authors.lastname: Bardin
authors.forename: Bernard
authors.initials: B
authors.lastname: Prum
authors.forename: François
authors.initials: F
authors.lastname: Cornélis
mesh_terms: D000328:Adult; D000483:Alleles; D001172:Arthritis, Rheumatoid / Q000235:genetics*; D005260:Female; D008040:Genetic Linkage; D020022:Genetic Predisposition to Disease; D005838:Genotype; D006801:Humans; D050835:Interferon Regulatory Factors / Q000235:genetics*; D015810:Linkage Disequilibrium; D008180:Lupus Erythematosus, Systemic / Q000235:genetics*; D008297:Male; D008875:Middle Aged
chemical_list: C431713:IRF5 protein, human; D050835:Interferon Regulatory Factors