title: Phylogeny of the order Choreotrichida (Ciliophora, Spirotricha, Oligotrichea) as inferred from morphology, ultrastructure, ontogenesis, and SSrRNA gene sequences.
abstract: The phylogeny within the order Choreotrichida is reconstructed using (i) morphologic, ontogenetic, and ultrastructural evidence for the cladistic approach and (ii) the small subunit ribosomal RNA (SSrRNA) gene sequences, including the new sequence of Rimostrombidium lacustris. The morphologic cladograms and the gene trees converge rather well for the Choreotrichida, demonstrating that hyaline and agglutinated loricae do not characterize distinct lineages, i.e., both lorica types can be associated with the most highly developed ciliary pattern. The position of Rimostrombidium lacustris within the family Strobilidiidae is corroborated by the genealogical analyses. The diagnosis of the genus Tintinnidium is improved, adding cytological features, and the genus is divided into two subgenera based on the structure of the somatic kineties. The diagnosis of the family Lohmanniellidae and the genus Lohmanniella are improved, and Rimostrombidium glacicolum Petz, Song and Wilbert, 1995 is affiliated.
authors.affiliation: Department of Organismal Biology, University of Salzburg, Hellbrunnerstrasse 34, A-5020 Salzburg, Austria. sabine.agatha@sbg.ac.at
authors.forename: Sabine
authors.initials: S
authors.lastname: Agatha
authors.forename: Michaela C
authors.initials: MC
authors.lastname: Strüder-Kypke
mesh_terms: D000818:Animals; D016798:Ciliophora / Q000145:classification* / Q000166:cytology / Q000235:genetics; D017125:Genes, Protozoan; D020459:Genes, rRNA / Q000235:genetics; D008969:Molecular Sequence Data; D010802:Phylogeny; D016053:RNA, Protozoan / Q000235:genetics; D012335:RNA, Ribosomal / Q000235:genetics; D013045:Species Specificity
chemical_list: D016053:RNA, Protozoan; D012335:RNA, Ribosomal