title: New developments in the InterPro database.
abstract: InterPro is an integrated resource for protein families, domains and functional sites, which integrates the following protein signature databases: PROSITE, PRINTS, ProDom, Pfam, SMART, TIGRFAMs, PIRSF, SUPERFAMILY, Gene3D and PANTHER. The latter two new member databases have been integrated since the last publication in this journal. There have been several new developments in InterPro, including an additional reading field, new database links, extensions to the web interface and additional match XML files. InterPro has always provided matches to UniProtKB proteins on the website and in the match XML file on the FTP site. Additional matches to proteins in UniParc (UniProt archive) are now available for download in the new match XML files only. The latest InterPro release (13.0) contains more than 13 000 entries, covering over 78% of all proteins in UniProtKB. The database is available for text- and sequence-based searches via a webserver (http://www.ebi.ac.uk/interpro), and for download by anonymous FTP (ftp://ftp.ebi.ac.uk/pub/databases/interpro). The InterProScan search tool is now also available via a web service at http://www.ebi.ac.uk/Tools/webservices/WSInterProScan.html.
authors.affiliation: EMBL Outstation-European Bioinformatics Institute Hinxton, Cambridge, UK. mulder@ebi.ac.uk
authors.forename: Nicola J
authors.initials: NJ
authors.lastname: Mulder
authors.forename: Rolf
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authors.lastname: Apweiler
authors.forename: Teresa K
authors.initials: TK
authors.lastname: Attwood
authors.forename: Amos
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authors.lastname: Bairoch
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authors.lastname: Bateman
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authors.lastname: Binns
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authors.lastname: Bork
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authors.lastname: Buillard
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authors.lastname: Cerutti
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authors.lastname: Courcelle
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authors.forename: Louise
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authors.lastname: Daugherty
authors.forename: Mark
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authors.lastname: Dibley
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authors.lastname: Finn
authors.forename: Wolfgang
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authors.lastname: Fleischmann
authors.forename: Julian
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authors.lastname: Gough
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authors.lastname: Haft
authors.forename: Nicolas
authors.initials: N
authors.lastname: Hulo
authors.forename: Sarah
authors.initials: S
authors.lastname: Hunter
authors.forename: Daniel
authors.initials: D
authors.lastname: Kahn
authors.forename: Alexander
authors.initials: A
authors.lastname: Kanapin
authors.forename: Anish
authors.initials: A
authors.lastname: Kejariwal
authors.forename: Alberto
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authors.lastname: Labarga
authors.forename: Petra S
authors.initials: PS
authors.lastname: Langendijk-Genevaux
authors.forename: David
authors.initials: D
authors.lastname: Lonsdale
authors.forename: Rodrigo
authors.initials: R
authors.lastname: Lopez
authors.forename: Ivica
authors.initials: I
authors.lastname: Letunic
authors.forename: Martin
authors.initials: M
authors.lastname: Madera
authors.forename: John
authors.initials: J
authors.lastname: Maslen
authors.forename: Craig
authors.initials: C
authors.lastname: McAnulla
authors.forename: Jennifer
authors.initials: J
authors.lastname: McDowall
authors.forename: Jaina
authors.initials: J
authors.lastname: Mistry
authors.forename: Alex
authors.initials: A
authors.lastname: Mitchell
authors.forename: Anastasia N
authors.initials: AN
authors.lastname: Nikolskaya
authors.forename: Sandra
authors.initials: S
authors.lastname: Orchard
authors.forename: Christine
authors.initials: C
authors.lastname: Orengo
authors.forename: Robert
authors.initials: R
authors.lastname: Petryszak
authors.forename: Jeremy D
authors.initials: JD
authors.lastname: Selengut
authors.forename: Christian J A
authors.initials: CJ
authors.lastname: Sigrist
authors.forename: Paul D
authors.initials: PD
authors.lastname: Thomas
authors.forename: Franck
authors.initials: F
authors.lastname: Valentin
authors.forename: Derek
authors.initials: D
authors.lastname: Wilson
authors.forename: Cathy H
authors.initials: CH
authors.lastname: Wu
authors.forename: Corin
authors.initials: C
authors.lastname: Yeats
mesh_terms: D030562:Databases, Protein; D020407:Internet; D017434:Protein Structure, Tertiary; D011506:Proteins / Q000737:chemistry / Q000145:classification / Q000502:physiology; D020539:Sequence Analysis, Protein; D018511:Systems Integration; D014584:User-Computer Interface
chemical_list: D011506:Proteins