title: Sequence handling by sequence analysis toolbox v1.0.
abstract: The fact that mass spectrometry have become a high-throughput method calls for bioinformatic tools for automated sequence handling and prediction. For efficient use of bioinformatic tools, it is important that these tools are integrated or interfaced with each other. The purpose of sequence analysis toolbox v1.0 was to have a general purpose sequence analyzing tool that can import sequences obtained by high-throughput sequencing methods. The program includes algorithms for calculation or prediction of isoelectric point, hydropathicity index, transmembrane segments, and glycosylphosphatidyl inositol-anchored proteins.
authors.affiliation: Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense.
authors.forename: Christian Ravnsborg
authors.initials: CR
authors.lastname: Ingrell
authors.forename: Rune
authors.initials: R
authors.lastname: Matthiesen
authors.forename: Ole Nørregaard
authors.initials: ON
authors.lastname: Jensen
mesh_terms: D019295:Computational Biology / Q000379:methods*; D030562:Databases, Protein; D017261:Glycosylphosphatidylinositols / Q000032:analysis; D007526:Isoelectric Point; D008970:Molecular Weight; D011506:Proteins / Q000032:analysis; D020539:Sequence Analysis, Protein / Q000379:methods*; D012984:Software
chemical_list: D017261:Glycosylphosphatidylinositols; D011506:Proteins