title: All-optical switching in plant blue light photoreceptor phototropin.
abstract: We theoretically analyze all-optical switching in the recently characterized LOV2 domain from Avena sativa (oat) phot1 phototropin, a blue-light plant photoreceptor, based on nonlinear intensity-induced excited-state absorption. The transmission of a cw probe laser beam at 660 nm corresponding to the peak absorption of the first excited L-state, through the LOV2 sample, is switched by a pulsed pump laser beam at 442 nm that corresponds to the maximum initial D state absorption. The switching characteristics have been analyzed using the rate equation approach, considering all the three intermediate states and transitions in the LOV2 photocycle. It is shown that for a given pump pulse intensity, there is an optimum pump pulsewidth for which the switching contrast is maximum. It is shown that the probe laser beam can be completely switched off (100% modulation) by the pump laser beam at 50 kW/cm2 for a concentration of 1 mM with sample thickness of 5.5 mm. The switching characteristics are sensitive to various parameters such as concentration, rate constant of L-state, peak pump intensity and pump pulse width. At typical values, the switch-off and switch-on time is 1.6 and 22.3 micros, respectively. The switching characteristics have also been used to design all-optical NOT and the universal NOR and NAND logic gates.
authors.affiliation: Department of Physics and Computer Science, Dayalbagh Educational Institute, Deemed University, Agra 282 005, India. sukhdevr@hotmail.com
authors.forename: Sukhdev
authors.initials: S
authors.lastname: Roy
authors.forename: Kapil
authors.initials: K
authors.lastname: Kulshrestha
mesh_terms: D018554:Avena / Q000502:physiology* / Q000528:radiation effects; D003198:Computer Simulation; D056931:Cryptochromes; D004307:Dose-Response Relationship, Radiation; D005420:Flavoproteins / Q000737:chemistry* / Q000528:radiation effects*; D008027:Light; D008954:Models, Biological; D008956:Models, Chemical; D008958:Models, Molecular; D010786:Photoreceptor Cells / Q000502:physiology* / Q000528:radiation effects; D011487:Protein Conformation / Q000528:radiation effects; D011829:Radiation Dosage
chemical_list: D056931:Cryptochromes; D005420:Flavoproteins