Denatured state effects and the origin of nonclassical phi values in protein folding.
Analysis of the phi value is one of the most powerful tools to understand the transition state for protein folding. In principle, phi values are expected to fall in the range of 0 to 1. However, a noticeable number of phi values have been observed which are either less than 0 or greater than 1. The origin of such phi values, sometimes referred to as noncanonical or nonclassical phi values, has been controversial. Here we show that mutational effects upon denatured state energetics can lead to nonclassical phi values.
Cho
Jae-Hyun
JH
Graduate Program in Biochemistry and Structural Biology, Department of Chemistry, State University of New York at Stony Brook, Stony Brook, NY 11794-3400, USA.
Raleigh
Daniel P
DP
D008956:Models, Chemical; D011489:Protein Denaturation; D017510:Protein Folding; D011506:Proteins / Q000737:chemistry*; D015203:Reproducibility of Results; D013816:Thermodynamics
D011506:Proteins