QSAR models for predicting the activity of non-peptide luteinizing hormone-releasing hormone (LHRH) antagonists derived from erythromycin A using quantum chemical properties.
Multiple linear regression (MLR) combined with genetic algorithm (GA) and Bayesian-regularized Genetic Neural Networks (BRGNNs) were used to model the binding affinity (pK(I)) of 38 11,12-cyclic carbamate derivatives of 6-O-methylerythromycin A for the Human Luteinizing Hormone-Releasing Hormone (LHRH) receptor using quantum chemical descriptors. A multiparametric MLR equation with good statistical quality was obtained that describes the features relevant for antagonistic activity when the substituent at the position 3 of the erythronolide core was varied. In addition, four-descriptor linear and nonlinear models were established for the whole dataset. Such models showed high statistical quality. However, the BRGNN model was better than the linear model according to the external validation process. In general, our linear and nonlinear models reveal that the binding affinity of the compounds studied for the LHRH receptor is modulated by electron-related terms.
Fernández
Michael
M
Molecular Modeling Group, Center for Biotechnological Studies, University of Matanzas, Matanzas, C.P. 44740, Cuba.
Caballero
Julio
J
D000818:Animals; D001499:Bayes Theorem; D016466:CHO Cells; D006224:Cricetinae; D003412:Cricetulus; D004917:Erythromycin / Q000031:analogs & derivatives*; D007987:Gonadotropin-Releasing Hormone / Q000037:antagonists & inhibitors*; D006801:Humans; D016014:Linear Models; D008956:Models, Chemical; D016571:Neural Networks, Computer; D010455:Peptides; D021281:Quantitative Structure-Activity Relationship; D011789:Quantum Theory; D012984:Software
D010455:Peptides; D007987:Gonadotropin-Releasing Hormone; D004917:Erythromycin