title: GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists.
abstract: We present GENECODIS, a web-based tool that integrates different sources of information to search for annotations that frequently co-occur in a set of genes and rank them by statistical significance. The analysis of concurrent annotations provides significant information for the biologic interpretation of high-throughput experiments and may outperform the results of standard methods for the functional analysis of gene lists. GENECODIS is publicly available at http://genecodis.dacya.ucm.es/.
authors.affiliation: BioComputing Unit, National Center of Biotechnology (CNB-CSIC), C/Darwin 3, Campus Universidad Autónoma de Madrid, 28049 Madrid, Spain. pcarmona@cnb.uam.es
authors.forename: Pedro
authors.initials: P
authors.lastname: Carmona-Saez
authors.forename: Monica
authors.initials: M
authors.lastname: Chagoyen
authors.forename: Francisco
authors.initials: F
authors.lastname: Tirado
authors.forename: Jose M
authors.initials: JM
authors.lastname: Carazo
authors.forename: Alberto
authors.initials: A
authors.lastname: Pascual-Montano
mesh_terms: D019295:Computational Biology / Q000379:methods* / Q000706:statistics & numerical data; D005800:Genes, Fungal; D006801:Humans; D020407:Internet; D012441:Saccharomyces cerevisiae / Q000235:genetics*; D012984:Software / Q000706:statistics & numerical data