GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists.
We present GENECODIS, a web-based tool that integrates different sources of information to search for annotations that frequently co-occur in a set of genes and rank them by statistical significance. The analysis of concurrent annotations provides significant information for the biologic interpretation of high-throughput experiments and may outperform the results of standard methods for the functional analysis of gene lists. GENECODIS is publicly available at http://genecodis.dacya.ucm.es/.
Carmona-Saez
Pedro
P
BioComputing Unit, National Center of Biotechnology (CNB-CSIC), C/Darwin 3, Campus Universidad Autónoma de Madrid, 28049 Madrid, Spain. pcarmona@cnb.uam.es
Chagoyen
Monica
M
Tirado
Francisco
F
Carazo
Jose M
JM
Pascual-Montano
Alberto
A
D019295:Computational Biology / Q000379:methods* / Q000706:statistics & numerical data; D005800:Genes, Fungal; D006801:Humans; D020407:Internet; D012441:Saccharomyces cerevisiae / Q000235:genetics*; D012984:Software / Q000706:statistics & numerical data