Leifsonia ginsengi sp. nov., isolated from ginseng root.
A Gram-positive, rod-shaped, non-motile bacterium, designated strain wged11T, was isolated from the root of ginseng, and its taxonomic position was established using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences showed that this organism formed a robust clade with recognized species of the genus Leifsonia. Strain wged11T was characterized by a high content of omega-cyclohexylundecanoic and anteiso- and iso-branched saturated fatty acids, MK-11 as the major menaquinone and DL-2,4-diaminobutyric acid in its cell-wall peptidoglycan. The DNA G+C content of strain wged11T was 66.4 mol%. Levels of similarity between the 16S rRNA gene sequence of strain wged11(T) and those of the type strains of other members of the genus Leifsonia ranged from 94.7 to 97.6 %. The mean level of DNA-DNA relatedness between strain wged11T and Leifsonia poae DSM 15202T, its nearest phylogenetic neighbour, was 35.3 %. Based on these findings, strain wged11T (=CGMCC 4.3491T=JCM 13908T) is proposed as the type strain of a novel species of the genus Leifsonia, Leifsonia ginsengi sp. nov.
Qiu
Fubin
F
College of Life Sciences, Capital Normal University, Beijing 100037, People's Republic of China.
Huang
Ying
Y
State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100080, People's Republic of China.
Sun
Lei
L
College of Life Sciences, Heibei University, Baoding 071002, People's Republic of China.|College of Life Sciences, Capital Normal University, Beijing 100037, People's Republic of China.
Zhang
Xiaoxia
X
College of Life Sciences, Capital Normal University, Beijing 100037, People's Republic of China.
Liu
Zhiheng
Z
State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100080, People's Republic of China.
Song
Wei
W
College of Life Sciences, Capital Normal University, Beijing 100037, People's Republic of China.
D000192:Actinomycetales / Q000145:classification* / Q000166:cytology / Q000302:isolation & purification* / Q000502:physiology; D000613:Aminobutyrates / Q000032:analysis; D015373:Bacterial Typing Techniques; D001482:Base Composition; D002681:China; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D004275:DNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D005227:Fatty Acids / Q000032:analysis / Q000737:chemistry; D020459:Genes, rRNA; D008969:Molecular Sequence Data; D009068:Movement; D005894:Panax / Q000382:microbiology*; D010457:Peptidoglycan / Q000737:chemistry; D010802:Phylogeny; D018517:Plant Roots / Q000382:microbiology*; D011809:Quinones / Q000032:analysis / Q000737:chemistry; D012329:RNA, Bacterial / Q000235:genetics; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D017422:Sequence Analysis, DNA; D012689:Sequence Homology, Nucleic Acid
D000613:Aminobutyrates; D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D005227:Fatty Acids; D010457:Peptidoglycan; D011809:Quinones; D012329:RNA, Bacterial; D012336:RNA, Ribosomal, 16S; C005959:2,4-diaminobutyric acid