title: Investigation of total bacterial and ammonia-oxidizing bacterial community composition in a full-scale aerated submerged biofilm reactor for drinking water pretreatment in China.
abstract: The community composition of total bacteria and ammonia-oxidizing bacteria in a full-scale aerated submerged biofilm reactor for drinking water pretreatment was characterized by analysis of 16S rRNA gene and the functional gene amoA, respectively. Sampling was performed in February and in July. 16S rRNA gene clone libraries revealed 13 bacterial divisions. At both sampling dates, the majority of clone sequences were related to the Alpha- and Betaproteobacteria. A minor proportion belonged to the following groups: Gammaproteobacteria, Deltaproteobacteria, Nitrospira, Firmicutes, Acidobacteria, Verrucomicrobia, Actinobacteria, Planctomycetes, Chloroflexi, Gemmatimonadetes and the Cytophaga-Flavobacterium-Bacteroides group. Some sequences related to bacteria owning high potential metabolic capacities were detected in both samples, such as Rhodobacter-like rRNA gene sequences. Surveys of cloned amoA genes from the two biofilm samples revealed ammonia-oxidizing bacterial sequences affiliated with the Nitrosomonas oligotropha lineage, Nitrosomonas communis lineage. An unknown Nitrosomonas group of amoA gene sequences was also detected.
authors.affiliation: School of Life Science and Biotechnology, Shanghai Jiaotong University, Shanghai, China.
authors.forename: Ying-Ying
authors.initials: YY
authors.lastname: Qin
authors.forename: Dao-Tang
authors.initials: DT
authors.lastname: Li
authors.forename: Hong
authors.initials: H
authors.lastname: Yang
mesh_terms: D000641:Ammonia / Q000378:metabolism*; D018441:Biofilms / Q000254:growth & development*; D019149:Bioreactors; D002681:China; D004269:DNA, Bacterial / Q000032:analysis / Q000302:isolation & purification; D017753:Ecosystem; D015723:Gene Library; D008969:Molecular Sequence Data; D010084:Oxidation-Reduction; D010802:Phylogeny; D020560:Proteobacteria / Q000145:classification / Q000235:genetics / Q000302:isolation & purification* / Q000378:metabolism; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D017422:Sequence Analysis, DNA; D018508:Water Purification / Q000379:methods*; D014881:Water Supply
chemical_list: D004269:DNA, Bacterial; D012336:RNA, Ribosomal, 16S; D000641:Ammonia