title: A suite of natural language processing tools developed for the I2B2 project.
abstract: Textual medical records contain a wealth of information that needs to be extracted and / or indexed in order to be analyzed and interpreted by the automated tools. We have developed a collection of natural language processing (NLP) tools to extract various types of information from unstructured medical records. The generic NLP components, when assembled in pipelines and initialized with custom configuration parameters, become a powerful medical data mining instrument. We have successfully extracted such medical concepts as diagnoses, comorbidities, discharge medications, and smoking status from various types of medical records.
authors.affiliation: Decision Systems Group, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
authors.forename: Sergey
authors.initials: S
authors.lastname: Goryachev
authors.forename: Margarita
authors.initials: M
authors.lastname: Sordo
authors.forename: Qing T
authors.initials: QT
authors.lastname: Zeng
mesh_terms: D000043:Abstracting and Indexing; D016247:Information Storage and Retrieval; D008499:Medical Records; D009323:Natural Language Processing