title: Three-dimensional identification of stem cells by computational holographic imaging.
abstract: We present an optical imaging system and mathematical algorithms for three-dimensional sensing and identification of stem cells. Data acquisition of stem cells is based on holographic microscopy in the Fresnel domain by illuminating the cells with a laser. In this technique, the holograms of stem cells are optically recorded with an image sensor array interfaced with a computer and three-dimensional images of the stem cells are reconstructed from the Gabor-filtered digital holograms. The Gabor wavelet transformation for feature extraction of the digital hologram is performed to improve the process of identification. The inverse Fresnel transformation of the Gabor-filtered digital hologram is performed to reconstruct the multi-scale three-dimensional images of the stem cells at different depths along the longitudinal direction. For recognition and classification of stem cells, a statistical approach using an empirical cumulative density function is introduced. The experiments indicate that the proposed system can be potentially useful for recognizing and classifying stem cells. To the best of our knowledge, this is the first report on using three-dimensional holographic microscopy for automated identification of stem cells.
authors.affiliation: Department of Electrical and Computer Engineering, U-2157, University of Connecticut, Storrs, CT 06269-2157, USA.
authors.forename: Inkyu
authors.initials: I
authors.lastname: Moon
authors.forename: Bahram
authors.initials: B
authors.lastname: Javidi
mesh_terms: D000465:Algorithms; D006368:Helianthus / Q000166:cytology; D006696:Holography / Q000295:instrumentation / Q000379:methods*; D021621:Imaging, Three-Dimensional; D010363:Pattern Recognition, Automated; D013234:Stem Cells / Q000166:cytology*