A fast algorithm aligning multiple microbial genomic sequences.
To compare large genomic DNA sequences of related organisms and of different species, researchers need efficient methods to align many long sequences. We developed a new tool Super Multiple Genome Alignment (SMGA for short), specially for rapid multiple global alignment of genomic sequences. SMGA can align a data set consisting of 50M of 9 enterobacterial genomic sequences in 40 minutes. Our method is faster when compared with other existing multiple sequences alignment method.
Hu
Guangyue
G
School of Mathematic Science and LMPC, Nankai University, Tianjin 300071, China d021866@mail.nankai.edu.cn.
Shen
Shiyi
S