title: New genetic map of rye composed of PCR-based molecular markers and its alignment with the reference map of the DS2 x RXL10 intercross.
abstract: A new genetic map of rye, developed by using the 541 x Ot1-3 F2 intercross, consists of 148 marker loci, including 99 RAPDs, 18 SSRs, 14 STSs, 9 SCARs and 7 ISSRs, and spans the distance of 1401.4 cM. To the 7 rye chromosomes, 8 linkage groups were assigned and compared with the reference map of the DS2 x RXL10 F2 intercross by using 24 common markers. The 2 combined maps contain altogether 611 marker loci (70-109 per chromosome) and constitute a substantial source of information useful for further genomic studies in rye. From 21 to 37 RAPD marker loci are distributed randomly along each chromosome length and their total number for all 7 rye chromosomes is 177. This abundance of RAPD marker loci in the rye genetic map can be exploited for development of SCARs in regions containing important genes or QTL.
authors.affiliation: Department of Genetics and Plant Breeding, University of Agriculture in Szczecin, Slowackiego 17, 71-434 Szczecin, Poland. pmasojc@agro.ar.szczecin.pl
authors.forename: Paweł
authors.initials: P
authors.lastname: Milczarski
authors.forename: Aneta
authors.initials: A
authors.lastname: Banek-Tabor
authors.forename: Karolina
authors.initials: K
authors.lastname: Lebiecka
authors.forename: Stefan
authors.initials: S
authors.lastname: Stojałowski
authors.forename: Beata
authors.initials: B
authors.lastname: Myśków
authors.forename: Piotr
authors.initials: P
authors.lastname: Masojć
mesh_terms: D001483:Base Sequence; D002874:Chromosome Mapping; D032461:Chromosomes, Plant / Q000235:genetics; D003433:Crosses, Genetic; D018744:DNA, Plant / Q000235:genetics; D005819:Genetic Markers; D016133:Polymerase Chain Reaction; D040641:Quantitative Trait Loci; D012434:Secale / Q000235:genetics*
chemical_list: D018744:DNA, Plant; D005819:Genetic Markers