title: Photochemistry of a retinal protonated schiff-base analogue mimicking the opsin shift of bacteriorhodopsin.
abstract: A retinal Schiff base analogue which artificially mimics the protein-induced red shifting of absorption in bacteriorhodopsin (BR) has been investigated with femtosecond multichannel pump probe spectroscopy. The objective is to determine if the catalysis of retinal internal conversion in the native protein BR, which absorbs at 570 nm, is directly correlated with the protein-induced Stokes shifting of this absorption band otherwise known as the "opsin shift". Results demonstrate that the red shift afforded in the model system does not hasten internal conversion relative to that taking place in a free retinal-protonated Schiff base (RPSB) in methanol solution, and stimulated emission takes place with biexponential kinetics and characteristic timescales of approximately 2 and 10.5 ps. This shows that interactions between the prosthetic group and the protein that lead to the opsin shift in BR are not directly involved in reducing the excited-state lifetime by nearly an order of magnitude. A sub-picosecond phase of spectral evolution, analogues of which are detected in photoexcited retinal proteins and RPSBs in solution, is observed after excitation anywhere within the intense visible absorption band. It consists of a large and discontinuous spectral shift in excited-state absorption and is assigned to electronic relaxation between excited states, a scenario which might also be relevant to those systems as well. Finally, a transient excess bleach component that tunes with the excitation wavelength is detected in the data and tentatively assigned to inhomogeneous broadening in the ground state absorption band. Possible sources of such inhomogeneity and its relevance to native RPSB photochemistry are discussed.
authors.affiliation: Department of Physical Chemistry, Hebrew University, Jerusalem 91904, Israel.
authors.forename: Oshrat
authors.initials: O
authors.lastname: Bismuth
authors.forename: Noga
authors.initials: N
authors.lastname: Friedman
authors.forename: Mordechai
authors.initials: M
authors.lastname: Sheves
authors.forename: Sanford
authors.initials: S
authors.lastname: Ruhman
mesh_terms: D000447:Aldehydes / Q000737:chemistry; D001436:Bacteriorhodopsins / Q000737:chemistry*; D001703:Biophysics / Q000379:methods; D002627:Chemistry, Physical / Q000379:methods; D000431:Ethanol / Q000737:chemistry; D007700:Kinetics; D008956:Models, Chemical; D010777:Photochemistry / Q000379:methods*; D017785:Photons; D011522:Protons; D017299:Rod Opsins / Q000737:chemistry*; D012545:Schiff Bases / Q000737:chemistry*; D055672:Static Electricity; D013696:Temperature
chemical_list: D000447:Aldehydes; D011522:Protons; D017299:Rod Opsins; D012545:Schiff Bases; D000431:Ethanol; D001436:Bacteriorhodopsins