Nucleotide sequence and secondary structure of 5S rRNA from Sphingobium chungbukense DJ77.
The 5S rRNA gene from Sphingobium chungbukense DJ77 was identified. The secondary structure of the 199-base-long RNA was proposed. The two-base-long D loop was the shortest among all of the known 5S rRNAs. The U19-U64 non-canonical pair in the helix II region was uniquely found in strain DJ77 among all of the sphingomonads.
Kwon
Hae-Ryong
HR
School of Life Sciences, Chungbuk National University, Cheongju, Chungbuk 361-763, Republic of Korea.
Kim
Young-Chang
YC
D001483:Base Sequence; D020459:Genes, rRNA; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation; D012329:RNA, Bacterial / Q000737:chemistry* / Q000235:genetics; D012341:RNA, Ribosomal, 5S / Q000737:chemistry* / Q000235:genetics*; D042301:Sphingomonadaceae / Q000235:genetics*
D012329:RNA, Bacterial; D012341:RNA, Ribosomal, 5S