Feasibility study using surface-enhanced Raman spectroscopy for the quantitative detection of tyrosine and serine phosphorylation.
We investigate the feasibility of colloid-based surface enhanced Raman scattering (SERS) as a highly sensitive technique for detecting peptide phosphorylation at serine and tyrosine residues. Using the recently reported drop-coating deposition Raman method we validate our SERS spectra against normal Raman spectra that would otherwise be unobtainable at such low concentrations. Compared with existing techniques for quantifying peptide phosphorylation, such as high-performance liquid chromatography (HPLC), the short scanning and processing time associated with SERS makes it an attractive alternative for near-real-time measurement at sub micro-molar concentrations. Following pre-processing by Savistky-Golay second derivative (SGSD), the degree of phosphorylation of synthetic peptides is determined using multivariate spectral classification, interval partial least squares (iPLS). Furthermore, our results show that the technique is robust to interference from complex proteins and other phosphorylated compounds present at concentrations typically found in a screening assay.
Moger
J
J
School of Physics, University of Exeter, Stocker Road, Exeter, EX4 4QL, UK. j.moger@ex.ac.uk
Gribbon
P
P
Sewing
A
A
Winlove
C P
CP
D009842:Oligopeptides / Q000032:analysis* / Q000138:chemical synthesis / Q000737:chemistry; D010766:Phosphorylation; D012680:Sensitivity and Specificity; D012694:Serine / Q000032:analysis* / Q000737:chemistry; D013059:Spectrum Analysis, Raman; D014443:Tyrosine / Q000032:analysis* / Q000737:chemistry
D009842:Oligopeptides; D014443:Tyrosine; D012694:Serine