title: Network activity-independent coordinated gene expression program for synapse assembly.
abstract: Global biological datasets generated by genomics, transcriptomics, and proteomics provide new approaches to understanding the relationship between the genome and the synapse. Combined transcriptome analysis and multielectrode recordings of neuronal network activity were used in mouse embryonic primary neuronal cultures to examine synapse formation and activity-dependent gene regulation. Evidence for a coordinated gene expression program for assembly of synapses was observed in the expression of 642 genes encoding postsynaptic and plasticity proteins. This synaptogenesis gene expression program preceded protein expression of synapse markers and onset of spiking activity. Continued expression was followed by maturation of morphology and electrical neuronal networks, which was then followed by the expression of activity-dependent genes. Thus, two distinct sequentially active gene expression programs underlie the genomic programs of synapse function.
authors.affiliation: Genes to Cognition Programme, The Wellcome Trust Sanger Institute, Hinxton, Cambridge CB10 1SA, United Kingdom.
authors.forename: Luis M
authors.initials: LM
authors.lastname: Valor
authors.forename: Paul
authors.initials: P
authors.lastname: Charlesworth
authors.forename: Lawrence
authors.initials: L
authors.lastname: Humphreys
authors.forename: Chris N G
authors.initials: CN
authors.lastname: Anderson
authors.forename: Seth G N
authors.initials: SG
authors.lastname: Grant
mesh_terms: D000818:Animals; D002478:Cells, Cultured; D020869:Gene Expression Profiling; D005786:Gene Expression Regulation; D016678:Genome; D023281:Genomics; D006624:Hippocampus / Q000196:embryology*; D051379:Mice; D008954:Models, Biological; D009474:Neurons / Q000378:metabolism; D020411:Oligonucleotide Array Sequence Analysis; D040901:Proteomics / Q000379:methods; D013569:Synapses / Q000502:physiology*; D013997:Time Factors; D014158:Transcription, Genetic