title: Lack of control of nitrite assimilation by ammonium in an oceanic picocyanobacterium, Synechococcus sp. strain WH 8103.
abstract: In cyanobacteria, the transcriptional activator NtcA is involved in global nitrogen control and, in the absence of ammonium, regulates the expression of genes involved in the assimilation of alternative nitrogen sources. The oceanic picocyanobacterium Synechococcus sp. strain WH 8103 harbors a copy of ntcA, but in the present study, we show that unlike other marine cyanobacteria that have been investigated, this strain is capable of coassimilating nitrite when grown in the presence of ammonium. Transcript levels for the genes encoding the nitrate/nitrite-bispecific permease NrtP and nitrate reductase (NarB) were substantially down-regulated by ammonium, whereas the abundances of nitrite reductase (NirA) transcripts were similar in nitrite- and ammonium-grown cells. The growth of Synechococcus sp. strain WH 8103 in medium containing both ammonium and nitrite resulted in only minor changes in the expression profile in comparison to that of nitrite-grown cells with the exception that the gene encoding the high-affinity ammonium transporter Amt1 was down-regulated to the levels seen in ammonium-grown cells. Whereas the expression of nrtP, narB, and amt1 appears to be NtcA dependent in this marine cyanobacterium, the transcription and expression of nirA appear not to be. The ability to coassimilate nitrite and reduced-nitrogen sources like ammonium may be an adaptive trait that enables oceanic strains like Synechococcus sp. strain WH 8103 to exploit the low nitrite concentrations found in oceanic surface waters that are not available to their principal and more numerous competitor, Prochlorococcus.
authors.affiliation: School of Biological and Environmental Sciences, University of Stirling, Stirling FK9 4LA, United Kingdom. mw4@stir.ac.uk
authors.forename: Michael
authors.initials: M
authors.lastname: Wyman
authors.forename: Clare
authors.initials: C
authors.lastname: Bird
mesh_terms: D001426:Bacterial Proteins / Q000378:metabolism*; D027682:Cation Transport Proteins / Q000378:metabolism; D017931:DNA Primers; D004268:DNA-Binding Proteins / Q000378:metabolism*; D015964:Gene Expression Regulation, Bacterial; D026901:Membrane Transport Proteins / Q000378:metabolism; D050901:Nitrate Reductase / Q000378:metabolism; D009573:Nitrites / Q000378:metabolism*; D000644:Quaternary Ammonium Compounds / Q000378:metabolism*; D020133:Reverse Transcriptase Polymerase Chain Reaction; D046940:Synechococcus / Q000235:genetics / Q000378:metabolism*; D014157:Transcription Factors / Q000378:metabolism*
chemical_list: D001426:Bacterial Proteins; D027682:Cation Transport Proteins; D017931:DNA Primers; D004268:DNA-Binding Proteins; D026901:Membrane Transport Proteins; D009573:Nitrites; C402432:NrtP protein, Cyanobacterium synechococcus; D000644:Quaternary Ammonium Compounds; D014157:Transcription Factors; C075617:ntcA protein, Synechococcus; D050901:Nitrate Reductase