title: Segmentation of brain MRI in young children.
abstract: This paper describes an automatic tissue segmentation algorithm for brain MRI of young children. Existing segmentation methods developed for the adult brain do not take into account the specific tissue properties present in the brain MRI of young children. We examine the suitability of state-of-the-art methods developed for the adult brain when applied to the segmentation of the young child brain MRI. We develop a method of creation of a population-specific atlas from young children using a single manual segmentation. The method is based on non-linear propagation of the segmentation into population and subsequent affine alignment into a reference space and averaging. Using this approach we significantly improve the performance of the popular EM segmentation algorithm on brain MRI of young children.
authors.affiliation: Visual Information Processing Group, Department of Computing, Imperial College London.
authors.forename: Maria
authors.initials: M
authors.lastname: Murgasova
authors.forename: Leigh
authors.initials: L
authors.lastname: Dyet
authors.forename: David
authors.initials: D
authors.lastname: Edwards
authors.forename: Mary
authors.initials: M
authors.lastname: Rutherford
authors.forename: Joseph V
authors.initials: JV
authors.lastname: Hajnal
authors.forename: Daniel
authors.initials: D
authors.lastname: Rueckert
mesh_terms: D000465:Algorithms; D001185:Artificial Intelligence; D001921:Brain / Q000033:anatomy & histology*; D002675:Child, Preschool; D005260:Female; D006801:Humans; D007089:Image Enhancement / Q000379:methods*; D007090:Image Interpretation, Computer-Assisted / Q000379:methods*; D007223:Infant; D008279:Magnetic Resonance Imaging / Q000379:methods*; D008297:Male; D010363:Pattern Recognition, Automated / Q000379:methods*; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity