Prevalence of human astrovirus genotypes associated with acute gastroenteritis among children in Belém, Brazil.
Worldwide human astroviruses (HAstV) have increasingly been recognized as causative agents of viral gastroenteritis, mainly in infants and young children. The aim of this study was to assess the epidemiology and genotype diversity of HAstVs detected in children who participated in a trial in Belém, Brazil with the rhesus human reassortant rotavirus vaccine tetravalent (RRV-TV). From April/1990 to August/1992, 624 diarrheic stool samples were tested by enzyme immunoassay (EIA) for HAstV, with a positive rate of 4.0%. Reverse transcription-polymerase chain reaction (RT-PCR) was done in 129 samples (25 positive and 104 with twice the optical density (OD) value of negative control by EIA) being 33 positive. The overall positivity yielded by both methods was 5.4% (34/624). Genotyping of the 33 positive samples was done by type-specific RT-PCR and confirmed by sequence analysis. Phylogenetic analysis was performed using a 348-bp fragment of the ORF2 region of the capsid gene. HAstV-1 was the most prevalent, accounting for 45.5% of the isolates, followed by HAstV-2 (27.3%), HAstV-3 (12.1%), HAstV-4 (12.1%), and HAstV-6 (3.0%). The monthly distribution showed that HAstV-1 was predominant in the first year of study (May/1990 to May/1991) with highest prevalence in January/1991. HAstV-2 was predominant from July to November/1991 and HAstV-4 from September to October/1990. At 24 months of age, 30.6% of children had been infected by HAstV. The clinical symptoms registered during HAstV associated-diarrhea were usually mild. These data highlight the circulation of the different HAstV genotypes in Belém during the study period.
Gabbay
Yvone B
YB
Virology Section, Instituto Evandro Chagas, Secretaria de Vigilância em Saúde, Ministério da Saúde, Ananindeua, Pará, Brazil. yvonegabbay@iec.pa.gov.br
Linhares
Alexandre C
AC
Cavalcante-Pepino
Elielma L
EL
Nakamura
Liliany S
LS
Oliveira
Darleise S
DS
da Silva
Luciana Damascena
LD
Mascarenhas
Joana D'Arc P
JD
Oliveira
Consuelo S
CS
Monteiro
Talita Antônia F
TA
Leite
José Paulo G
JP
D000208:Acute Disease; D019350:Astroviridae Infections / Q000453:epidemiology* / Q000821:virology; D001938:Brazil / Q000453:epidemiology; D036022:Capsid Proteins / Q000235:genetics; D016022:Case-Control Studies; D002675:Child, Preschool; D015331:Cohort Studies; D003968:Diarrhea, Infantile / Q000453:epidemiology / Q000821:virology; D005243:Feces / Q000821:virology; D006801:Humans; D015994:Incidence; D007223:Infant; D001257:Mamastrovirus / Q000235:genetics*; D017720:Molecular Epidemiology; D016366:Open Reading Frames / Q000235:genetics; D010802:Phylogeny; D011933:Reagent Kits, Diagnostic; D020133:Reverse Transcriptase Polymerase Chain Reaction; D012621:Seasons; D013045:Species Specificity
D036022:Capsid Proteins; D011933:Reagent Kits, Diagnostic