title: Immunomagnetic CD45 depletion does not improve cytokeratin 20 RT-PCR in colorectal cancer.
abstract: BACKGROUND
  Cytokeratin 20 reverse transcriptase polymerase chain reaction (CK20 RT-PCR) of blood and bone marrow specimens has been suggested for assessment of hematogenously disseminated tumor cell (DTC) spread in colorectal cancer (CRC) patients. Considerable discrepancies among the studies reported indicate a need for better evaluation procedures. We investigated whether mononucleated cell (MNC) enrichment by Ficoll density gradient centrifugation followed by immunomagnetic depletion of CD45-positive cells (extended enrichment) allows better detection of DTC-associated CK20 mRNA compared to MNC enrichment by Ficoll density gradient centrifugation alone (Ficoll enrichment).
  
  
  METHODS
  We analyzed 53 samples [38 peripheral blood (PB), 15 bone marrow (BM)] from 38 CRC patients. Extended enrichment was performed for 30 specimens (PB and BM, n=15 each), and Ficoll enrichment for 23 blood specimens. Total RNA was extracted, reverse-transcribed and analyzed by real-time RT-PCR using a LightCycler instrument.
  
  
  RESULTS
  Despite extended enrichment, 10 PB and 8 BM samples could not be analyzed because of low cellular yield. The depletion efficiency of CD45 separation was 2 log. RT-PCR of the housekeeping gene PBGD resulted in high and varied crossing point values (mean 37.1+3.0) for five PB and seven BM specimens. Ficoll enrichment yielded 23 analyzable blood specimens for which the mean crossing point value was 26.7+0.5 in PBGD RT-PCR. CK20 RT-PCR of 23 blood samples (all from Dukes D patients) revealed CK20 transcripts in four cases (17%).
  
  
  CONCLUSIONS
  Extended enrichment was not superior to Ficoll enrichment; in fact, the sensitivity was lower. Improvement of the reported CK20 RT-PCR assay of Ficoll-enriched MNC populations is warranted.
authors: Department of Surgery, Ludwig Boltzmann Research Institute of Surgical Oncology, Danube Hospital SMZ Ost, Vienna, Austria. christoph.ausch@wienkav.at
authors: Christoph
authors: C
authors: Ausch
authors: Nadia
authors: N
authors: Dandachi
authors: Veronika
authors: V
authors: Buxhofer-Ausch
authors: Marija
authors: M
authors: Balic
authors: Klaus
authors: K
authors: Huber
authors: Thomas
authors: T
authors: Bauernhofer
authors: Emil
authors: E
authors: Ogris
authors: Wolfgang
authors: W
authors: Hinterberger
authors: Stephan
authors: S
authors: Braun
authors: Rudolf
authors: R
authors: Schiessel
mesh_terms: D015703:Antigens, CD / Q000097:blood / Q000302:isolation & purification; D001854:Bone Marrow Cells / Q000473:pathology; D002499:Centrifugation, Density Gradient; D015179:Colorectal Neoplasms / Q000235:genetics / Q000276:immunology; D006801:Humans; D018189:Immunomagnetic Separation / Q000379:methods; D053554:Keratin-20 / Q000097:blood / Q000235:genetics*; D017493:Leukocyte Common Antigens / Q000097:blood / Q000302:isolation & purification*; D020133:Reverse Transcriptase Polymerase Chain Reaction
chemical_list: D015703:Antigens, CD; D053554:Keratin-20; D017493:Leukocyte Common Antigens