title: Water-mediated electron transfer between protein redox centers.
abstract: Recent experimental and theoretical investigations show that water molecules between or near redox partners can significantly affect their electron-transfer (ET) properties. Here we study the effects of intervening water molecules on the electron self-exchange reaction of azurin (Az), by performing a conformational sampling on the water medium and by using a newly developed ab initio method to calculate transfer integrals between molecular redox sites. We show that the insertion of water molecules at the interface between the copper active sites of Az dimers slightly increases the overall ET rate, while some favorable water conformations can considerably enhance the ET kinetics. These features are traced back to the interplay of two competing factors: the electrostatic interaction between the water and protein subsystems (mainly opposing the ET process for the water arrangements drawn from MD simulations) and the effectiveness of water in mediating ET coupling pathways. Such an interplay provides a physical basis for the found absence of correlation between the electronic couplings derived through ab initio electronic structure calculations and the related quantities obtained through the Empirical Pathways (EP) method. In fact, the latter does not account for electrostatic effects on the transfer integrals. Thus, we conclude that the water-mediated electron tunneling is not controlled by the geometry of a single physical pathway. We discuss the results in terms of the interplay between different ET pathways controlled by the conformational changes of one of the water molecules via its electrostatic influence. Finally, we examine the dynamical effects of the interfacial water and check the validity of the Condon approximation.
authors: National Center on nanoStructures and bioSystems at Surfaces (S3) of INFM-CNR, Modena, Italy. smigliore@unimore.it
authors: Agostino
authors: A
authors: Migliore
authors: Stefano
authors: S
authors: Corni
authors: Rosa Di
authors: RD
authors: Felice
authors: Elisa
authors: E
authors: Molinari
mesh_terms: D001400:Azurin / Q000737:chemistry*; D001665:Binding Sites; D003198:Computer Simulation; D019281:Dimerization; D004583:Electrons; D008956:Models, Chemical; D008958:Models, Molecular; D010084:Oxidation-Reduction; D011550:Pseudomonas aeruginosa / Q000737:chemistry; D011789:Quantum Theory; D055672:Static Electricity; D013816:Thermodynamics; D014867:Water / Q000737:chemistry*
chemical_list: D014867:Water; D001400:Azurin