title: A sequence related to rice Pong transposable element displays transcriptional activation by in vitro culture and reveals somaclonal variations in maize.
abstract: Miniature inverted-repeat transposable elements (MITEs) are nonautonomous elements that are abundant in plant genomes. The rice MITE mPing was shown to be mobilized by anther culture, and the associated transposon Pong was shown to transpose actively in an Oryza sativa 'indica' rice cell-culture line. We have identified 3 sequences in maize named ZmTPAPong-like 1, 2, and 3 that displayed homology with the transposase of Pong. Here, we show that these sequences are differentially expressed during the in vitro androgenetic process in maize. We also demonstrate that the ZmTPAPong-like 1 and 3 sequences reveal somaclonal variations among plants regenerated from the calli of a doubled haploid line. These data suggest that the ZmTPAPong-like sequences could form part of a Zea mays element related to the rice Pong element. The possible activation of this newly discovered element under stress conditions is discussed.
authors.affiliation: INRA, UMR INRA-UBP Amélioration et Santé des Plantes, 63,000 Clermont-Ferrand, France. barret@clermont.inra.fr
authors.forename: P
authors.initials: P
authors.lastname: Barret
authors.forename: M
authors.initials: M
authors.lastname: Brinkman
authors.forename: M
authors.initials: M
authors.lastname: Beckert
mesh_terms: D000595:Amino Acid Sequence; D001483:Base Sequence; D015139:Blotting, Southern; D002478:Cells, Cultured; D002999:Clone Cells; D004251:DNA Transposable Elements; D018506:Gene Expression Regulation, Plant; D014644:Genetic Variation; D008969:Molecular Sequence Data; D012275:Oryza / Q000235:genetics*; D012689:Sequence Homology, Nucleic Acid; D015533:Transcriptional Activation; D003313:Zea mays / Q000166:cytology / Q000235:genetics*
chemical_list: D004251:DNA Transposable Elements