title: Idefix insulator activity can be modulated by nearby regulatory elements.
abstract: Insulators play important roles in controlling gene activity and maintaining regulatory independence between neighbouring genes. In this article, we show that the enhancer-blocking activity of the insulator present within the LTR retrotransposon Idefix can be abolished if two copies of the region containing the insulator--specifically, the long terminal repeat (LTR)--are fused to the retrotransposon's 5' untranslated region (5' UTR). The presence of this combination of two [LTR-5' UTR] modules is a prerequisite for the loss of enhancer-blocking activity. We further show that the 5' UTR causes flanking genomic sequences to be displaced to the nuclear periphery, which is not observed when two insulators are present by themselves. This study thus provides a functional link between insulators and independent genomic modules, which may cooperate to allow the specific regulation of defined genomic loci via nuclear repositioning. It further illustrates the complexity of genomic regulation within a chromatic environment with multiple functional elements.
authors.affiliation: INSERM, U384, Faculté de Médecine, BP38, 63001 Clermont-Ferrand, France.
authors.forename: E
authors.initials: E
authors.lastname: Brasset
authors.forename: F
authors.initials: F
authors.lastname: Bantignies
authors.forename: F
authors.initials: F
authors.lastname: Court
authors.forename: S
authors.initials: S
authors.lastname: Cheresiz
authors.forename: C
authors.initials: C
authors.lastname: Conte
authors.forename: C
authors.initials: C
authors.lastname: Vaury
mesh_terms: D020121:5' Untranslated Regions / Q000737:chemistry*; D000818:Animals; D002467:Cell Nucleus / Q000235:genetics; D004330:Drosophila / Q000235:genetics; D005786:Gene Expression Regulation; D016678:Genome; D038101:Insulator Elements; D050436:Regulatory Elements, Transcriptional; D018626:Retroelements; D020079:Terminal Repeat Sequences; D019076:Transgenes
chemical_list: D020121:5' Untranslated Regions; D018626:Retroelements