title: Involving undergraduates in the annotation and analysis of global gene expression studies: creation of a maize shoot apical meristem expression database.
abstract: Through a multi-university and interdisciplinary project we have involved undergraduate biology and computer science research students in the functional annotation of maize genes and the analysis of their microarray expression patterns. We have created a database to house the results of our functional annotation of >4400 genes identified as being differentially regulated in the maize shoot apical meristem (SAM). This database is located at http://sam.truman.edu and is now available for public use. The undergraduate students involved in constructing this unique SAM database received hands-on training in an intellectually challenging environment, which has prepared them for graduate and professional careers in biological sciences. We describe our experiences with this project as a model for effective research-based teaching of undergraduate biology and computer science students, as well as for a rich professional development experience for faculty at predominantly undergraduate institutions.
authors.affiliation: Division of Science, Truman State University, Kirksville, Missouri 63501, USA.
authors.forename: Brent
authors.initials: B
authors.lastname: Buckner
authors.forename: Jon
authors.initials: J
authors.lastname: Beck
authors.forename: Kate
authors.initials: K
authors.lastname: Browning
authors.forename: Ashleigh
authors.initials: A
authors.lastname: Fritz
authors.forename: Lisa
authors.initials: L
authors.lastname: Grantham
authors.forename: Eneda
authors.initials: E
authors.lastname: Hoxha
authors.forename: Zhian
authors.initials: Z
authors.lastname: Kamvar
authors.forename: Ashley
authors.initials: A
authors.lastname: Lough
authors.forename: Olga
authors.initials: O
authors.lastname: Nikolova
authors.forename: Patrick S
authors.initials: PS
authors.lastname: Schnable
authors.forename: Michael J
authors.initials: MJ
authors.lastname: Scanlon
authors.forename: Diane
authors.initials: D
authors.lastname: Janick-Buckner
mesh_terms: D016208:Databases, Factual; D018506:Gene Expression Regulation, Plant; D017343:Genes, Plant; D005823:Genetics / Q000193:education*; D006801:Humans; D048088:Informatics; D018519:Meristem / Q000235:genetics*; D013334:Students; D014495:Universities; D003313:Zea mays / Q000235:genetics*