title: Precision of light intensity measurement in biological optical microscopy.
abstract: Standardization and calibration of optical microscopy systems have become an important issue owing to the increasing role of biological imaging in high-content screening technology. The proper interpretation of data from high-content screening imaging experiments requires detailed information about the capabilities of the systems, including their available dynamic range, sensitivity and noise. Currently available techniques for calibration and standardization of digital microscopes commonly used in cell biology laboratories provide an estimation of stability and measurement precision (noise) of an imaging system at a single level of signal intensity. In addition, only the total noise level, not its characteristics (spectrum), is measured. We propose a novel technique for estimation of temporal variability of signal and noise in microscopic imaging. The method requires registration of a time series of images of any stationary biological specimen. The subsequent analysis involves a multi-step process, which separates monotonic, periodic and random components of every pixel intensity change in time. The technique allows simultaneous determination of dark, photonic and multiplicative components of noise present in biological measurements. Consequently, a respective confidence interval (noise level) is obtained for each level of signal. The technique is validated using test sets of biological images with known signal and noise characteristics. The method is also applied to assess uncertainty of measurement obtained with two CCD cameras in a wide-field microscope.
authors: Department of Plant Anatomy and Cytology, Faculty of Biology and Protection of Environment, University of Silesia, Jagiellonska 28, Katowice, Poland. tytus@flowcyt.cyto.purdue.edu
authors: Tytus
authors: T
authors: Bernas
authors: David
authors: D
authors: Barnes
authors: Elikplimi K
authors: EK
authors: Asem
authors: J Paul
authors: JP
authors: Robinson
authors: Bartek
authors: B
authors: Rajwa
mesh_terms: D000465:Algorithms; D000818:Animals; D002417:Cattle; D002478:Cells, Cultured; D042783:Endothelial Cells / Q000378:metabolism; D008027:Light; D008853:Microscopy / Q000592:standards*; D055095:Optics and Photonics; D017603:Signal Detection, Psychological; D014404:Tubulin / Q000378:metabolism
chemical_list: D014404:Tubulin