title: Isolated CP1 domain of Escherichia coli leucyl-tRNA synthetase is dependent on flanking hinge motifs for amino acid editing activity.
abstract: Protein synthesis and its fidelity rely upon the aminoacyl-tRNA synthetases. Leucyl-tRNA synthetase (LeuRS), isoleucyl-tRNA synthetase (IleRS), and valyl-tRNA synthetase (ValRS) have evolved a discrete editing domain called CP1 that hydrolyzes the respective incorrectly misaminoacylated noncognate amino acids. Although active CP1 domain fragments have been isolated for IleRS and ValRS, previous reports suggested that the LeuRS CP1 domain required idiosyncratic adaptations to confer editing activity independent of the full-length enzyme. Herein, characterization of a series of rationally designed Escherichia coli LeuRS fragments showed that the beta-strands, which link the CP1 domain to the aminoacylation core of LeuRS, are required for editing of mischarged tRNALeu. Hydrolytic activity was also enhanced by inclusion of short flexible peptides that have been called "hinges" at the end of both LeuRS beta-strands. We propose that these long beta-strand extensions of the LeuRS CP1 domain interact specifically with the tRNA for post-transfer editing of misaminoacylated amino acids.
authors.affiliation: Department of Biology and Biochemistry, 369 Science and Research Building II, University of Houston, Houston, Texas 77204-5001, USA.
authors.forename: Aswini K
authors.initials: AK
authors.lastname: Betha
authors.forename: Amy M
authors.initials: AM
authors.lastname: Williams
authors.forename: Susan A
authors.initials: SA
authors.lastname: Martinis
mesh_terms: D020816:Amino Acid Motifs; D029968:Escherichia coli Proteins; D006868:Hydrolysis; D007935:Leucine-tRNA Ligase / Q000737:chemistry* / Q000502:physiology; D010446:Peptide Fragments; D015202:Protein Engineering; D017393:RNA Editing
chemical_list: D029968:Escherichia coli Proteins; D010446:Peptide Fragments; D007935:Leucine-tRNA Ligase