Extensive selection for the enrichment of G4 DNA motifs in transcriptional regulatory regions of warm blooded animals.
A comprehensive analysis of potential G4 DNA motifs (G4Ms) in genomic regions flanking transcription start sites (TSS) was performed across 13 animal species. We found that G4Ms are significantly enriched in the transcriptional regulatory regions (TRRs) of warm-blooded animals. Further analysis of human genes in different temporal groups reveals that the enrichment is not specific to genes found only in warm-blooded species but instead exist in a wide range of genes. Our findings therefore suggest that the high prevalence of G4Ms in TRRs is extensively selected in warm-blooded animals, supporting the hypothesis that G4Ms are involved in the regulation of gene transcription.
Zhao
Yiqiang
Y
State Key Laboratory for Agrobiotechnology, China Agricultural University, Beijing, 10094, China.
Du
Zhuo
Z
Li
Ning
N
D000818:Animals; D019295:Computational Biology; D021901:DNA, Intergenic; D006801:Humans; D050436:Regulatory Elements, Transcriptional / Q000235:genetics*; D012641:Selection, Genetic; D012689:Sequence Homology, Nucleic Acid; D024363:Transcription Initiation Site
D021901:DNA, Intergenic